A comprehensive database for integrated analysis of omics data in autoimmune diseases

BMC Bioinformatics

Víctor González-Rumayor¹  Raúl López-Domínguez²  Adrián García-Moreno²  Jordi Martorell-Marugán³  Juan Antonio Villatoro-García⁴  Pedro Carmona-Sáez⁴  Daniel Toro-Domínguez⁵  Kevin Troule⁶  Fátima Al-Shahrour⁶  Gonzalo Gómez-López⁶  María Peña-Chilet⁷  Joaquín Dopazo⁸  Guillermo Barturen⁹  Marta E. Alarcón-Riquelme^1,10  Julio Sáez-Rodríguez^1,11  Adoración Martín-Gómez^1,12 

[1] Atrys Health S.A., Barcelona, Spain;Bioinformatics Unit, GENYO. Centre for Genomics and Oncological Research: Pfizer/University of Granada/Andalusian Regional Government, PTS Granada, 18016, Granada, Spain;Bioinformatics Unit, GENYO. Centre for Genomics and Oncological Research: Pfizer/University of Granada/Andalusian Regional Government, PTS Granada, 18016, Granada, Spain;Atrys Health S.A., Barcelona, Spain;Bioinformatics Unit, GENYO. Centre for Genomics and Oncological Research: Pfizer/University of Granada/Andalusian Regional Government, PTS Granada, 18016, Granada, Spain;Department of Statistics, University of Granada, 18071, Granada, Spain;Bioinformatics Unit, GENYO. Centre for Genomics and Oncological Research: Pfizer/University of Granada/Andalusian Regional Government, PTS Granada, 18016, Granada, Spain;Genetics of Complex Diseases, GENYO. Centre for Genomics and Oncological Research: Pfizer/University of Granada/Andalusian Regional Government, PTS Granada, 18016, Granada, Spain;Bioinformatics Unit, Spanish National Cancer Center, CNIO, Madrid, Spain;Clinical Bioinformatics Area, Fundación Progreso y Salud (FPS), CDCA, Hospital Virgen del Rocío, 41013, Seville, Spain;Bioinformatics in Rare Diseases (BiER), Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), FPS, Hospital Virgen del Rocio, 41013, Seville, Spain;Computational Systems Medicine, Institute of Biomedicine of Seville (IBIS), Hospital Virgen del Rocio, 41013, Seville, Spain;Clinical Bioinformatics Area, Fundación Progreso y Salud (FPS), CDCA, Hospital Virgen del Rocío, 41013, Seville, Spain;Bioinformatics in Rare Diseases (BiER), Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), FPS, Hospital Virgen del Rocio, 41013, Seville, Spain;Computational Systems Medicine, Institute of Biomedicine of Seville (IBIS), Hospital Virgen del Rocio, 41013, Seville, Spain;INB-ELIXIR-es, FPS, Hospital Virgen del Rocío, 42013, Seville, Spain;Genetics of Complex Diseases, GENYO. Centre for Genomics and Oncological Research: Pfizer/University of Granada/Andalusian Regional Government, PTS Granada, 18016, Granada, Spain;Genetics of Complex Diseases, GENYO. Centre for Genomics and Oncological Research: Pfizer/University of Granada/Andalusian Regional Government, PTS Granada, 18016, Granada, Spain;Unit of Chronic Inflammatory Diseases, Institute of Environmental Medicine, Karolinska Institutet, 17177, Stockholm, Sweden;Joint Research Centre for Computational Biomedicine (JRC-COMBINE), Faculty of Medicine, RWTH Aachen University, 52074, Aachen, Germany;European Molecular Biology Laboratory-The European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, CB10 1SD, Hinxton, Cambridgeshire, UK;Institute for Computational Biomedicine, Bioquant Heidelberg, Faculty of Medicine, Heidelberg University Hospital and Heidelberg University, 69120, Heidelberg, Germany;Nephrology Units, AADEA: Asociación Andaluza de Enfermedades Autoinmunes, Hospital de Poniente, 04700, Almería, Spain;

关键词: Autoimmune disease;    Database;    GEO;    Transcriptomics;    Epigenomics;    Curation;    Dataset;    Interferon signature;    Gene expression;    Meta-analysis;   

DOI  :  10.1186/s12859-021-04268-4

来源: Springer

【 授权许可】

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