Journal of Animal Science and Biotechnology | |
Immunoglobulin genes and diversity: what we have learned from domestic animals | |
Yaofeng Zhao2  Ning Li2  Ping Wang2  Zhiguo Wei3  Liming Ren2  Zhancai Liu1  Yi Sun2  | |
[1] Department of Biochemistry, Jiaozuo Teachers Colleague, Jiaozuo, 454001, Henan, P. R. China;State Key Laboratory of Agrobiotechnology, College of Biological Sciences; National Engineering Laboratory for Animal Breeding, China Agricultural University, Beijing, 100193, P. R. China;College of Animal Science and Technology, Henan University of Science and Technology, Henan, 471003, P. R. China | |
关键词: Immunoglobulin gene; Domestic animals; Diversity; | |
Others : 814165 DOI : 10.1186/2049-1891-3-18 |
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received in 2012-02-17, accepted in 2012-06-11, 发布年份 2012 | |
【 摘 要 】
This review focuses on the diversity of immunoglobulin (Ig) genes and Ig isotypes that are expressed in domestic animals. Four livestock species—cattle, sheep, pigs, and horses—express a full range of Ig heavy chains (IgHs), including μ, δ, γ, ϵ, and α. Two poultry species (chickens and ducks) express three IgH isotypes, μ, υ, and α, but not δ. The κ and λ light chains are both utilized in the four livestock species, but only the λ chain is expressed in poultry. V(D)J recombination, somatic hypermutation (SHM), and gene conversion (GC) are three distinct mechanisms by which immunoglobulin variable region diversity is generated. Different domestic animals may use distinct means to diversify rearranged variable regions of Ig genes.
【 授权许可】
2012 Sun et al.; licensee BioMed Ltd.
【 预 览 】
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【 图 表 】
Figure 1.
【 参考文献 】
- [1]De Genst E, Saerens D, Muyldermans S, Conrath K: Antibody repertoire development in camelids. Dev Comp Immunol 2006, 30(1–2):187-198.
- [2]Dooley H, Flajnik MF: Antibody repertoire development in cartilaginous fish. Dev Comp Immunol 2006, 30(1–2):43-56.
- [3]Jung D, Giallourakis C, Mostoslavsky R, Alt FW: Mechanism and control of V(D)J recombination at the immunoglobulin heavy chain locus. Annu Rev Immunol 2006, 24:541-570.
- [4]Peled JU, Kuang FL, Iglesias-Ussel MD, Roa S, Kalis SL, Goodman MF, Scharff MD: The biochemistry of somatic hypermutation. Annu Rev Immunol 2008, 26:481-511.
- [5]McCormack WT, Tjoelker LW, Thompson CB: Avian B-cell development: generation of an immunoglobulin repertoire by gene conversion. Annu Rev Immunol 1991, 9:219-241.
- [6]Murphy K, Travers P, Walport M: Janeway's immunobiology. 7th edition. New York: Garland Science; 2008.
- [7]Zhao Y, Kacskovics I, Rabbani H, Hammarstrom L: Physical mapping of the bovine immunoglobulin heavy chain constant region gene locus. J Biol Chem 2003, 278(37):35024-35032.
- [8]Schroeder HW: Similarity and divergence in the development and expression of the mouse and human antibody repertoires. Dev Comp Immunol 2006, 30(1–2):119-135.
- [9]Zhao Y, Kacskovics I, Pan Q, Liberles DA, Geli J, Davis SK, Rabbani H, Hammarstrom L: Artiodactyl IgD: the missing link. J Immunol 2002, 169(8):4408-4416.
- [10]Tobin-Janzen TC, Womack JE: Comparative mapping of IGHG1, IGHM, FES, and FOS in domestic cattle. Immunogenetics 1992, 36(3):157-165.
- [11]Hayes HC, Petit EJ: Mapping of the beta-lactoglobulin gene and of an immunoglobulin M heavy chain-like sequence to homoeologous cattle, sheep, and goat chromosomes. Mamm Genome 1993, 4(4):207-210.
- [12]Chowdhary BP, Fronicke L, Gustavsson I, Scherthan H: Comparative analysis of the cattle and human genomes: detection of ZOO-FISH and gene mapping-based chromosomal homologies. Mamm Genome 1996, 7(4):297-302.
- [13]Nussenzweig MC, Shaw AC, Sinn E, Danner DB, Holmes KL, Morse HC, Leder P: Allelic exclusion in transgenic mice that express the membrane form of immunoglobulin mu. Science 1987, 236(4803):816-819.
- [14]Iglesias A, Lamers M, Kohler G: Expression of immunoglobulin delta chain causes allelic exclusion in transgenic mice. Nature 1987, 330(6147):482-484.
- [15]Roth PE, Doglio L, Manz JT, Kim JY, Lo D, Storb U: Immunoglobulin gamma 2b transgenes inhibit heavy chain gene rearrangement, but cannot promote B cell development. J Exp Med 1993, 178(6):2007-2021.
- [16]Sinclair MC, Gilchrist J, Aitken R: Bovine IgG repertoire is dominated by a single diversified VH gene family. J Immunol 1997, 159(8):3883-3889.
- [17]Lopez O, Perez C, Wylle D: A single VH family and long CDR3s are the targets for hypermutation in bovine immunoglobulin heavy chains. Immunol Rev 1998, 162(1):55-66.
- [18]Shojaei F, Saini SS, Kaushik AK: Unusually long germline DH genes contribute to large sized CDR3H in bovine antibodies. Mol Immunol 2003, 40(1):61-67.
- [19]Koti M, Kataeva G, Kaushik AK: Novel atypical nucleotide insertions specifically at VH-DH junction generate exceptionally long CDR3H in cattle antibodies. Mol Immunol 2010, 47(11–12):2119-2128.
- [20]Hosseini A, Campbell G, Prorocic M, Aitken R: Duplicated copies of the bovine JH locus contribute to the Ig repertoire. Int Immunol 2004, 16(6):843.
- [21]Almagro JC, Hernandez I, Ramirez MC, Vargas-Madrazo E: Structural differences between the repertoires of mouse and human germline genes and their evolutionary implications. Immunogenetics 1998, 47(5):355-363.
- [22]Pasman Y, Saini SS, Smith E, Kaushik AK: Organization and genomic complexity of bovine lambda-light chain gene locus. Vet Immunol Immunopathol , 135(3-4):306-313.
- [23]Butler JE, Sun J, Wertz N, Sinkora M: Antibody repertoire development in swine. Dev Comp Immunol 2006, 30(1–2):199-221.
- [24]Butler JE, Wertz N, Deschacht N, Kacskovics I: Porcine IgG: structure, genetics, and evolution. Immunogenetics 2009, 61(3):209-230.
- [25]Eguchi-Ogawa T, Wertz N, Sun XZ, Puimi F, Uenishi H, Wells K, Chardon P, Tobin GJ, Butler JE: Antibody repertoire development in fetal and neonatal piglets. XI. The relationship of variable heavy chain gene usage and the genomic organization of the variable heavy chain locus. J Immunol 2010, 184(7)):3734-3742.
- [26]Sun J, Kacskovics I, Brown WR, Butler JE: Expressed swine VH genes belong to a small VH gene family homologous to human VHIII. J Immunol 1994, 153(12):5618-5627.
- [27]Arun SS, Breuer W, Hermanns W: Immunohistochemical examination of light-chain expression (lambda/kappa ratio) in canine, feline, equine, bovine and porcine plasma cells. Zentralbl Veterinarmed A 1996, 43(9):573-576.
- [28]Schwartz JC, Lefranc MP, Murtaugh MP: Organization, complexity and allelic diversity of the porcine (Sus scrofa domestica) immunoglobulin lambda locus. Immunogenetics , : - . Epub ahead of print
- [29]Schwartz JC, Lefranc MP, Murtaugh MP: Evolution of the porcine (Sus scrofa domestica) immunoglobulin kappa locus through germline gene conversion. mmunogenetics , : - . Epub ahead of print
- [30]Wagner B, Miller DC, Lear TL, Antczak DF: The complete map of the Ig heavy chain constant gene region reveals evidence for seven IgG isotypes and for IgD in the horse. J Immunol 2004, 173(5):3230-3242.
- [31]Wagner B, Greiser-Wilke I, Wege AK, Radbruch A, Leibold W: Evolution of the six horse IGHG genes and corresponding immunoglobulin gamma heavy chains. Immunogenetics 2002, 54(5):353-364.
- [32]Sun Y, Wang C, Wang Y, Zhang T, Ren L, Hu X, Zhang R, Meng Q, Guo Y, Fei J, et al.: A comprehensive analysis of germline and expressed immunoglobulin repertoire in the horse. Dev Comp Immunol 2010, 34(9):1009-1020.
- [33]Almagro JC, Martinez L, Smith SL, Alagon A, Estevez J, Paniagua J: Analysis of the horse V(H) repertoire and comparison with the human IGHV germline genes, and sheep, cattle and pig V(H) sequences. Mol Immunol 2006, 43(11):1836-1845.
- [34]Ford JE, Home WA, Gibson DM: Light chain isotype regulation in the horse, Characterization of Ig kappa genes. J Immunol 1994, 153(3):1099-1111.
- [35]Home WA, Ford JE, Gibson DM: L chain isotype regulation in horse, I. Characterization of Ig lambda genes. J Immunol 1992, 149(12):3927-3936.
- [36]Zhao Y, Rabbani H, Shimizu A, Hammarstrom L: Mapping of the chicken immunoglobulin heavy-chain constant region gene locus reveals an inverted alpha gene upstream of a condensed upsilon gene. Immunology 2000, 101(3):348-353.
- [37]Lundqvist ML, Middleton DL, Hazard S, Warr GW: The immunoglobulin heavy chain locus of the duck. Genomic organization and expression of D, J, and C region genes. J Biol Chem 2001, 276(50):46729-46736.
- [38]Dahan A, Reynaud CA, Weill JC: Nucleotide sequence of the constant region of a chicken mu heavy chain immunoglobulin mRNA. Nucleic Acids Res 1983, 11(16):5381-5389.
- [39]Magor KE, Warr GW, Bando Y, Middleton DL, Higgins DA: Secretory immune system of the duck (Anas platyrhynchos), Identification and expression of the genes encoding IgA and IgM heavy chains. Eur J Immunol 1998, 28(3):1063-1068.
- [40]Choi JW, Kim JK, Seo HW, Cho BW, Song G, Han JY: Molecular cloning and comparative analysis of immunoglobulin heavy chain genes from Phasianus colchicus, Meleagris gallopavo, and Coturnix japonica. Vet Immunol Immunopathol 2010, 136(3–4):248-256.
- [41]Warr GW, Magor KE, Higgins DA: IgY: clues to the origins of modern antibodies. Immunol Today 1995, 16(8):392-398.
- [42]Magor KE, Higgins DA, Middleton DL, Warr GW: One gene encodes the heavy chains for three different forms of IgY in the duck. J Immunol 1994, 153(12):5549-5555.
- [43]Mansikka A: Chicken IgA H chains, Implications concerning the evolution of H chain genes. J Immunol 1992, 149(3):855-861.
- [44]Reynaud CA, Dahan A, Anquez V, Weill JC: Somatic hyperconversion diversifies the single Vh gene of the chicken with a high incidence in the D region. Cell 1989, 59(1):171-183.
- [45]Reynaud CA, Anquez V, Weill JC: The chicken D locus and its contribution to the immunoglobulin heavy chain repertoire. Eur J Immunol 1991, 21(11):2661-2670.
- [46]Magor KE, Higgins DA, Middleton DL, Warr GW: cDNA sequence and organization of the immunoglobulin light chain gene of the duck, Anas platyrhynchos. Dev Comp Immunol 1994, 18(6):523-531.
- [47]Reynaud CA, Anquez V, Grimal H, Weill JC: A hyperconversion mechanism generates the chicken light chain preimmune repertoire. Cell 1987, 48(3):379-388.
- [48]McCormack WT, Thompson CB: Chicken IgL variable region gene conversions display pseudogene donor preference and 5' to 3' polarity. Genes Dev 1990, 4(4):548-558.