Ion-pumping microbial rhodopsin protein classification by machine learning approach

BMC Bioinformatics

Research

Senthil Prasad Elumalai¹  Chander Raman Suri²  Busi Siddhardha³  Muthu Krishnan Selvaraj⁴  Anil Kumar Pinnaka⁴  Anamika Thakur⁵  Manoj Kumar⁵ 

[1] Biochemical Engineering Research and Process Development Centre, Institute of Microbial Technology, Council of Scientific and Industrial Research (CSIR-IMTECH), 160036, Chandigarh, India;Biosensor Department, Institute of Microbial Technology, Council of Scientific and Industrial Research (CSIR-IMTECH), 160036, Chandigarh, India;Department of Microbiology, School of Life Sciences, Pondicherry University, 605014, Puducherry, India;MTCC-Microbial Type Culture Collection and Gene Bank, Institute of Microbial Technology, Council of Scientific and Industrial Research (CSIR-IMTECH), 160036, Chandigarh, India;Virology Unit and Bioinformatics Centre, Institute of Microbial Technology, Council of Scientific and Industrial Research (CSIR-IMTECH), 160036, Chandigarh, India;

关键词: Microbial rhodopsins;    Actinorhodopsin;    Bacteriorhodopsin;    Halorhodopsin;    Proteorhodopsin;    Sensory rhodopsin;    Xanthorhodopsin;    Support vector machine;    SVM;    Protein prediction;   

DOI  :  10.1186/s12859-023-05138-x

 received in 2022-07-13, accepted in 2023-01-04,  发布年份 2023

来源: Springer

【 授权许可】

CC BY   
© The Author(s) 2023

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