An automated annotation tool for genomic DNA sequences using GeneScan and BLAST

Journal of genetics

Alok Bhattacharya2¹  K. Kosalai²  Andrew M. Lynn²  Harish Batra²  Pranjan Barman²  Chakresh Kumar Jain²  Nupur Thakur² 

[1] School of Life Sciences, Jawaharlal Nehru University, New Delhi 110 067, India$$;Bioinformatics Centre, Jawaharlal Nehru University, New Delhi 110 067, India$$

关键词: GeneScan;    BLAST;    genome annotation;    DNA sequence;    computational genomics;    Fourier analysis.;   

DOI  :  

学科分类：生物科学（综合）

来源: Indian Academy of Sciences

【 摘 要 】

Genomic sequence data are often available well before the annotated sequence is published. We present a method for analysis of genomic DNA to identify coding sequences using the GeneScan algorithm and characterize these resultant sequences by BLAST. The routines are used to develop a system for automated annotation of genome DNA sequences.

【 授权许可】

Unknown