Temporal RNA Integrity Analysis of Archived Spaceflight Biological Samples from ALSDA from 1991 to 2016

Degadillo Talburt, Elizabeth ; French, Alison J ; Lopez, Danielle K ; Polo, San-Huei Lai ; Boyko, Valery ; Dinh, Marie T ; Rask, Jon C ; Kaushik, Chakravarty ; Stewart, Helen J

关键词: BIOASSAY;    SPECIMENS;    EXTRACTION;    RIBONUCLEIC ACIDS;    VIABILITY;    PRESERVING;    LIQUID NITROGEN;    BIOMEDICAL DATA;    RODENTS;    FREEZING;    FUNCTIONAL ANALYSIS;    TEMPORAL DISTRIBUTION;    SPACE LABORATORIES;    SPACE FLIGHT;   

RP-ID  :  ARC-E-DAA-TN55906

学科分类：生物科学（综合）

美国|英语

来源: NASA Technical Reports Server

【 摘 要 】

The purpose of this study is to assess the quality of spaceflight tissues stored in Ames Life Science Data Archive (ALSDA) freezers. Garnering information for downstream functional analysis such as generation of omics datasets from tissues is, in part, dependent on the state of sample preservation. To assess the viability of a select group of tissues, RNA integrity number (RIN) values were calculated for RNA extracted from rodent livers. Rat livers from Spacelab Life Sciences 1 (SLS-1) and mouse livers from Commercial Biomedical Test Module 3 (CBTM-3), Rodent Research 1 (RR1), and Rodent Research 3 (RR3) were tested. It was found that mean RIN values from CBTM3, RR1, and RR3 were suitable for downstream functional analysis (RIN greater than 5) while the mean RIN value for SLS-1 was not (RIN equal to 2.5 plus or minus 0.1). Information from this study could lay the foundation for future efforts in determining the types of assays that are most appropriate for different tissues in ALSDA freezers, which would maximize the scientific return on rare spaceflight samples.