Comparative proteomic profiles of Aspergillus fumigatus and Aspergillus lentulus strains by surface-enhanced laser desorption ionization time-of-flight mass spectrometry (SELDI-TOF-MS)

BMC Microbiology

Methodology Article

Marie Arlotto¹  François Berger¹  Jean-Paul Issartel¹  Claudine Pinel²  Renée Grillot³  Hervé Pelloux³  Françoise Symoens⁴ 

[1] Institut de Neurosciences « Plateforme de Transcriptomique et de Protéomique Cliniques », (INSERM U836), Université Joseph Fourier, rue de la Chantourne, 38043, Grenoble, France;Institut de Neurosciences « Plateforme de Transcriptomique et de Protéomique Cliniques », (INSERM U836), Université Joseph Fourier, rue de la Chantourne, 38043, Grenoble, France;Laboratoire de Parasitologie-Mycologie, Institut de Biologie et Pathologie (IBP), Centre Hospitalier Universitaire Albert Michallon, BP 217, 38043, Grenoble, France;Laboratoire de Parasitologie-Mycologie, Institut de Biologie et Pathologie (IBP), Centre Hospitalier Universitaire Albert Michallon, BP 217, 38043, Grenoble, France;Mycology & Aerobiology Section, Scientific Institute of Public Health, 14 rue Juliette Wytsmanstreet, 1050, Brussels, Belgium;

关键词: SELDI-TOF mass spectrometry;    ProteinChips;    Aspergillus fumigatus;    Aspergillus lentulus;    proteomic analysis;   

DOI  :  10.1186/1471-2180-11-172

 received in 2011-02-15, accepted in 2011-07-28,  发布年份 2011

来源: Springer

【 摘 要 】

BackgroundSurface-enhanced laser desorption ionization time-of-flight mass spectrometry (SELDI-TOF-MS) was applied to analyze the protein profiles in both somatic and metabolic extracts of Aspergillus species. The study was carried out on some Aspergillus species within the Fumigati section (Aspergillus fumigatus wild-types and natural abnormally pigmented mutants, and Aspergillus lentulus). The aim was to validate whether mass spectrometry protein profiles can be used as specific signatures to discriminate different Aspergillus species or even mutants within the same species.ResultsThe growth conditions and the SELDI-TOF parameters were determined to generate characteristic protein profiles of somatic and metabolic extracts of Aspergillus fumigatus strains using five different ProteinChips®, eight growth conditions combining two temperatures, two media and two oxygenation conditions. Nine strains were investigated: three wild-types and four natural abnormally pigmented mutant strains of A. fumigatus and two strains of A. lentulus. A total of 242 fungal extracts were prepared. The spectra obtained are protein signatures linked to the physiological states of fungal strains depending on culture conditions. The best resolutions were obtained using the chromatographic surfaces CM10, NP20 and H50 with fractions of fungi grown on modified Sabouraud medium at 37°C in static condition. Under these conditions, the SELDI-TOF analysis allowed A. fumigatus and A. lentulus strains to be grouped into distinct clusters.ConclusionsSELDI-TOF analysis distinguishes A. fumigatus from A. lentulus strains and moreover, permits separate clusters of natural abnormally pigmented A. fumigatus strains to be obtained. In addition, this methodology allowed us to point out fungal components specifically produced by a wild-type strain or natural mutants. It offers attractive potential for further studies of the Aspergillus biology or pathogenesis.

【 授权许可】

CC BY   
© Pinel et al; licensee BioMed Central Ltd. 2011