U-Compare bio-event meta-service: compatible BioNLP event extraction services

BMC Bioinformatics

Research Article

K Bretonnel Cohen¹  Lawrence E Hunter¹  Christophe Roeder¹  Karin Verspoor¹  Jin-Dong Kim²  Sabine Bergler³  Halil Kilicoglu³  Sebastian Riedel⁴  Tomoko Ohta⁵  Rune Sætre⁶  Arzucan Özgür⁷  Dragomir R Radev⁸  Filip Ginter⁹  Jari Björne^1,10  Tapio Salakoski^1,10  Sofie Van Landeghem^1,11  Yves Van de Peer^1,11  Thomas Van Parys^1,11  Ekaterina Buyko^1,12  Udo Hahn^1,12  Hong-Woo Chun^1,13  Jun'ichi Tsujii^1,14  Alberto Pascual-Montano^1,15  Mariana Neves^1,15  Yoshinobu Kano^1,16  Sophia Ananiadou^1,17  Makoto Miwa^1,17  Sampo Pyysalo^1,17 

[1] Computational Bioscience Program, University of Colorado Denver School of Medicine, PO Box 6511, MS 830380045, Aurora, CO, USA;Database Center for Life Science (DBCLS), Research Organization of Information and System, Faculty of Engineering Bldg. 12, the University of Tokyo, 2-11-16, Yayoi, Bunkyo-ku, 113-0032, Tokyo, Japan;Department of Computer Science and Software Engineering, Concordia University, 1455 de Maisonneuve Blvd West, H3G 1M8, Montréal, QC, Canada;Department of Computer Science, University of Massachusetts Amherst, Massachusetts, USA;Department of Computer Science, University of Tokyo, Tokyo, Japan;Department of Computer and Information Science (IDI), Norwegian University of Science and Technology (NTNU), Sem Sælands vei 7-9, NO-7491, Trondheim, Norway;Department of Electrical Engineering and Computer Science, University of Michigan, 48109, Ann Arbor, MI, USA;Department of Computer Engineering, Bogazici University, 34342, Bebek, Istanbul, Turkey;Department of Electrical Engineering and Computer Science, University of Michigan, 48109, Ann Arbor, MI, USA;School of Information, University of Michigan, 48109, Ann Arbor, MI, USA;Department of Information Technology, University of Turku, Joukahaisenkatu 3-5, FI-20014, Turku, Finland;Department of Information Technology, University of Turku, Joukahaisenkatu 3-5, FI-20014, Turku, Finland;Turku Centre for Computer Science (TUCS), Joukahaisenkatu 3-5 B, FI-20520, Turku, Finland;Department of Plant Systems Biology, VIB/Ghent University, Technologiepark 927, B-9052, Ghent, Belgium;Jena University Language & Information Engineering (JULIE) Lab, Friedrich-Schiller-Universität Jena, Fürstengraben 30, D-07743, Jena, Germany;Korea Institute of Science and Technology Information, 245 Daehangno, Yuseong-gu, 305-806, Daejeon, South Korea;Microsoft Research Asia, Building 2, No. 5 Dan Ling Street, Haidian District, 100080, Beijing, P.R.China;National Center of Biotechnology-CSIC, C/Darwin 3, Campus de Cantoblanco, 28049, Madrid, Spain;Precursory Research for Embryonic Science and Technology (PRESTO), Japan Science and Technology Agency (JST), 4-1-8 Honcho, Kawaguchi, 332-0012, Saitama, Japan;National Institute of Informatics (NII), 2-1-2 Hitotsubashi, Chiyoda-ku, 101-8430, Tokyo, Japan;The National Centre for Text Mining (NaCTeM) and School of Computer Science, the University of Manchester, Manchester, UK;

关键词: Support Vector Machine;    Text Mining;    Shared Task;    Event Extraction;    Event Argument;   

DOI  :  10.1186/1471-2105-12-481

 received in 2011-07-31, accepted in 2011-12-18,  发布年份 2011

来源: Springer

【 授权许可】

CC BY   
© Kano et al; licensee BioMed Central Ltd. 2011