Channel-independent recreation of artefactual signals in chronically recorded local field potentials using machine learning

Brain Informatics

Ahmad Lotfi¹  Marcos Fabietti¹  Mufti Mahmud² 

[1] Department of Computer Science, Nottingham Trent University, Clifton Lane, NG11 8NS, Nottingham, UK;Department of Computer Science, Nottingham Trent University, Clifton Lane, NG11 8NS, Nottingham, UK;Medical Technologies Innovation Facility, Nottingham Trent University, Clifton Lane, NG11 8NS, Nottingham, UK;Computing and Informatics Research Centre, Nottingham Trent University, Clifton Lane, NG11 8NS, Nottingham, UK;

关键词: Local field potential;    Artefacts;    Neural networks;    Machine learning;    Neuronal signals;   

DOI  :  10.1186/s40708-021-00149-x

来源: Springer

【 摘 要 】

Acquisition of neuronal signals involves a wide range of devices with specific electrical properties. Combined with other physiological sources within the body, the signals sensed by the devices are often distorted. Sometimes these distortions are visually identifiable, other times, they overlay with the signal characteristics making them very difficult to detect. To remove these distortions, the recordings are visually inspected and manually processed. However, this manual annotation process is time-consuming and automatic computational methods are needed to identify and remove these artefacts. Most of the existing artefact removal approaches rely on additional information from other recorded channels and fail when global artefacts are present or the affected channels constitute the majority of the recording system. Addressing this issue, this paper reports a novel channel-independent machine learning model to accurately identify and replace the artefactual segments present in the signals. Discarding these artifactual segments by the existing approaches causes discontinuities in the reproduced signals which may introduce errors in subsequent analyses. To avoid this, the proposed method predicts multiple values of the artefactual region using long–short term memory network to recreate the temporal and spectral properties of the recorded signal. The method has been tested on two open-access data sets and incorporated into the open-access SANTIA (SigMate Advanced: a Novel Tool for Identification of Artefacts in Neuronal Signals) toolbox for community use.

【 授权许可】

CC BY