The Metaproteomics Initiative: a coordinated approach for propelling the functional characterization of microbiomes

Microbiome

Dirk Benndorf¹  Robert L. Hettich²  Alessandro Tanca³  Sergio Uzzau³  Pratik D. Jagtap⁴  Vincent G. H. Eijsink⁵  Magnus Ø. Arntzen⁵  Phillip B. Pope⁶  Nico Jehmlich⁷  Jana Seifert⁸  Dörte Becher⁹  Benoit J. Kunath^1,10  Paul Wilmes^1,10  Thilo Muth^1,11  Jean Armengaud^1,12  Catherine Juste^1,13  Céline Henry^1,13  Bart Mesuere^1,14  Tim Van Den Bossche^1,15 

[1] Bioprocess Engineering, Otto von Guericke University, 39106, Magdeburg, Germany;Bioprocess Engineering, Max Planck Institute for Dynamics of Complex Technical Systems, 39106, Magdeburg, Germany;Microbiology, Anhalt University of Applied Sciences, 06354, Köthen, Germany;Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA;Center for Research and Education on the Microbiota, Department of Biomedical Sciences, University of Sassari, Sassari, Italy;Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, 6-155 Jackson Hall, 321 Church Street SE, 55455, Minneapolis, MN, USA;Faculty of Chemistry, Biotechnology and Food Science, NMBU-Norwegian University of Life Sciences, 1432, Ås, Norway;Faculty of Chemistry, Biotechnology and Food Science, NMBU-Norwegian University of Life Sciences, 1432, Ås, Norway;Faculty of Biosciences, NMBU - Norwegian University of Life Sciences, 1432, Ås, Norway;Helmholtz-Centre for Environmental Research GmbH-UFZ, Department of Molecular Systems Biology, Permoserstrasse 15, 04318, Leipzig, Germany;HoLMiR - Hohenheim Center for Livestock Microbiome Research, University of Hohenheim, Leonore-Blosser-Reisen-Weg 3, 70599, Stuttgart, Germany;Institute of Animal Science, University of Hohenheim, Emil-Wolff-Str. 6-10, 70599, Stuttgart, Germany;Institute for Microbiology, Department for Microbial Proteomics, University of Greifswald, 17498, Greifswald, Germany;Luxembourg Centre for Systems Biomedicine and Department of Life Sciences and Medicine, University of Luxembourg, Esch-sur-Alzette, Luxembourg;Section eScience (S.3), Federal Institute for Materials Research and Testing, Berlin, Germany;Université Paris-Saclay, CEA, INRAE, Département Médicaments et Technologies pour la Santé (DMTS), SPI, 30200, Bagnols-sur-Cèze, France;Université Paris-Saclay, INRAE, AgroParisTech, Micalis Institute, 78350, Jouy-en-Josas, France;VIB-UGent Center for Medical Biotechnology, VIB, 9000, Ghent, Belgium;Department of Applied Mathematics, Computer Science and Statistics, Ghent University, Ghent, Belgium;VIB-UGent Center for Medical Biotechnology, VIB, 9000, Ghent, Belgium;Department of Biomolecular Medicine, Faculty of Medicine and Health Sciences, Ghent University, 9000, Ghent, Belgium;

关键词: Microbiome;    Metaproteomics;    Multi-omics;    Education;    Interactions;    Networking;   

DOI  :  10.1186/s40168-021-01176-w

来源: Springer

【 摘 要 】

Through connecting genomic and metabolic information, metaproteomics is an essential approach for understanding how microbiomes function in space and time. The international metaproteomics community is delighted to announce the launch of the Metaproteomics Initiative (www.metaproteomics.org), the goal of which is to promote dissemination of metaproteomics fundamentals, advancements, and applications through collaborative networking in microbiome research. The Initiative aims to be the central information hub and open meeting place where newcomers and experts interact to communicate, standardize, and accelerate experimental and bioinformatic methodologies in this field. We invite the entire microbiome community to join and discuss potential synergies at the interfaces with other disciplines, and to collectively promote innovative approaches to gain deeper insights into microbiome functions and dynamics.67FZ8DwkXAu1Qt5GgDCNmYVideo Abstract.

【 授权许可】

CC BY