Molar-Based Targeted Metabolic Profiling of Cyanobacterial Strains with Potential for Biological Production

Metabolites

Yudai Dempo¹  Erika Ohta¹  Yasumune Nakayama¹  Takeshi Bamba¹ 

[1] Department of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan;

关键词: metabolomics;    cyanobacteria;    biological production;    absolute quantitation;    triple quadrupole mass spectrometry;   

DOI  :  10.3390/metabo4020499

来源: mdpi

【 摘 要 】

Recently, cyanobacteria have become one of the most attractive hosts for biochemical production due to its high proliferative ability and ease of genetic manipulation. Several researches aimed at biological production using modified cyanobacteria have been reported previously. However, to improve the yield of bioproducts, a thorough understanding of the intercellular metabolism of cyanobacteria is necessary. Metabolic profiling techniques have proven to be powerful tools for monitoring cellular metabolism of various organisms and can be applied to elucidate the details of cyanobacterial metabolism. In this study, we constructed a metabolic profiling method for cyanobacteria using ¹³C-labeled cell extracts as internal standards. Using this method, absolute concentrations of 84 metabolites were successfully determined in three cyanobacterial strains which are commonly used as background strains for metabolic engineering. By comparing the differences in basic metabolic potentials of the three cyanobacterial strains, we found a well-correlated relationship between intracellular energy state and growth in cyanobacteria. By integrating our results with the previously reported biological production pathways in cyanobacteria, we found putative limiting step of carbon flux. The information obtained from this study will not only help gain insights in cyanobacterial physiology but also serve as a foundation for future metabolic engineering studies using cyanobacteria.

【 授权许可】

CC BY   
© 2014 by the authors; licensee MDPI, Basel, Switzerland.