A controlled comparison of thickness, volume and surface areas from multiple cortical parcellation packages

BMC Bioinformatics

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[1] 0000 0004 1936 7988, grid.4305.2, University of Edinburgh, Centre for Clinical Brain Sciences (CCBS), The Chancellor’s Building, 49 Little France Crescent, EH16 4SB, Edinburgh, UK;

关键词: Cortical parcellation;    Grey matter;    Thickness;    Volume;    Surface area;    Superior frontal gyrus;    Supramarginal gyrus;    Cingulate gyrus;    Brain;    Atlas;   

DOI  :  10.1186/s12859-019-2609-8

来源: publisher

【 摘 要 】

BackgroundCortical parcellation is an essential neuroimaging tool for identifying and characterizing morphometric and connectivity brain changes occurring with age and disease. A variety of software packages have been developed for parcellating the brain’s cortical surface into a variable number of regions but interpackage differences can undermine reproducibility. Using a ground truth dataset (Edinburgh_NIH10), we investigated such differences for grey matter thickness (GMth), grey matter volume (GMvol) and white matter surface area (WMsa) for the superior frontal gyrus (SFG), supramarginal gyrus (SMG), and cingulate gyrus (CG) from 4 parcellation protocols as implemented in the FreeSurfer, BrainSuite, and BrainGyrusMapping (BGM) software packages.ResultsCorresponding gyral definitions and morphometry approaches were not identical across the packages. As expected, there were differences in the bordering landmarks of each gyrus as well as in the manner in which variability was addressed. Rostral and caudal SFG and SMG boundaries differed, and in the event of a double CG occurrence, its upper fold was not always addressed. This led to a knock-on effect that was visible at the neighbouring gyri (e.g., knock-on effect at the SFG following CG definition) as well as gyral morphometric measurements of the affected gyri. Statistical analysis showed that the most consistent approaches were FreeSurfer’s Desikan-Killiany-Tourville (DKT) protocol for GMth and BrainGyrusMapping for GMvol. Package consistency varied for WMsa, depending on the region of interest.ConclusionsGiven the significance and implications that a parcellation protocol will have on the classification, and sometimes treatment, of subjects, it is essential to select the protocol which accurately represents their regions of interest and corresponding morphometrics, while embracing cortical variability.

【 授权许可】

CC BY