Lipids in Health and Disease | |
Diverse captive non-human primates with phytanic acid-deficient diets rich in plant products have substantial phytanic acid levels in their red blood cells | |
Joseph G Hacia1  Oliver A Ryder3  Laura A Cox5  Junsong Zhao1  Mazen W Karaman1  Patricia K Dranchak1  Jody Hey2  Ann B Moser4  | |
[1] Department of Biochemistry and Molecular Biology, Broad Center for Regenerative Medicine and Stem Cell Research, University of Southern California, Los Angeles, CA 90089, USA;Department of Genetics, Rutgers University, Piscataway, NJ, 08854, USA;Institute for Conservation and Research, Zoological Society of San Diego, Escondido, CA, 92027, USA;Department of Neurogenetics, Hugo W. Moser Research Institute at Kennedy Krieger, Baltimore, MD, 21205, USA;Department of Genetics, Southwest National Primate Research Center, Texas Biomedical Research Institute, San Antonio, TX, 78227, USA | |
关键词: Peroxisome; New world monkeys; Old world monkeys; Chlorophyll; Phytanic acid; | |
Others : 1160092 DOI : 10.1186/1476-511X-12-10 |
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received in 2012-10-30, accepted in 2013-01-31, 发布年份 2013 | |
【 摘 要 】
Background
Humans and rodents with impaired phytanic acid (PA) metabolism can accumulate toxic stores of PA that have deleterious effects on multiple organ systems. Ruminants and certain fish obtain PA from the microbial degradation of dietary chlorophyll and/or through chlorophyll-derived precursors. In contrast, humans cannot derive PA from chlorophyll and instead normally obtain it only from meat, dairy, and fish products.
Results
Captive apes and Old world monkeys had significantly higher red blood cell (RBC) PA levels relative to humans when all subjects were fed PA-deficient diets. Given the adverse health effects resulting from PA over accumulation, we investigated the molecular evolution of thirteen PA metabolism genes in apes, Old world monkeys, and New world monkeys. All non-human primate (NHP) orthologs are predicted to encode full-length proteins with the marmoset Phyh gene containing a rare, but functional, GA splice donor dinucleotide. Acox2, Scp2, and Pecr sequences had amino acid positions with accelerated substitution rates while Amacr had significant variation in evolutionary rates in apes relative to other primates.
Conclusions
Unlike humans, diverse captive NHPs with PA-deficient diets rich in plant products have substantial RBC PA levels. The favored hypothesis is that NHPs can derive significant amounts of PA from the degradation of ingested chlorophyll through gut fermentation. If correct, this raises the possibility that RBC PA levels could serve as a biomarker for evaluating the digestive health of captive NHPs. Furthermore, the evolutionary rates of the several genes relevant to PA metabolism provide candidate genetic adaptations to NHP diets.
【 授权许可】
2013 Moser et al.; licensee BioMed Central Ltd.
【 预 览 】
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Figure 1. | 100KB | Image | download |
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【 参考文献 】
- [1]Steinberg D, Avigan J, Mize CE, Baxter JH, Cammermeyer J, Fales HM, Highet PF: Effects of dietary phytol and phytanic acid in animals. J Lipid Res 1966, 7:684-691.
- [2]Wanders RJ, Komen J, Ferdinandusse S: Phytanic acid metabolism in health and disease. Biochim Biophys Acta 2011, 1811:498-507.
- [3]Watkins PA, Moser AB, Toomer CB, Steinberg SJ, Moser HW, Karaman MW, Ramaswamy K, Siegmund KD, Lee DR, Ely JJ, Ryder OA, Hacia JG: Identification of differences in human and great ape phytanic acid metabolism that could influence gene expression profiles and physiological functions. BMC Physiol 2010, 10:19. BioMed Central Full Text
- [4]Steinberg D: Phytanic acid storage disease (Refsum's disease). In Metabolic Basis of Inherited Disease. 5th edition. Edited by Stanbury JB, Wyngarden JB, Fredericksen DS, Goldstein JL, Brown MS. New York: McGraw Hill; 1983:731-747.
- [5]Ferdinandusse S, Zomer AW, Komen JC, van den Brink CE, Thanos M, Hamers FP, Wanders RJ, van der Saag PT, Poll-The BT, Brites P: Ataxia with loss of Purkinje cells in a mouse model for Refsum disease. Proc Natl Acad Sci U S A 2008, 105:17712-17717.
- [6]Karaman MW, Houck ML, Chemnick LG, Nagpal S, Chawannakul D, Sudano D, Pike BL, Ho VV, Ryder OA, Hacia JG: Comparative analysis of gene-expression patterns in human and african great ape cultured fibroblasts. Genome Res 2003, 13:1619-1630.
- [7]Brown PJ, Mei G, Gibberd FB, Burston D, Mayne PD, McClinchy JE, Sidey M: Diet and Refsum's disease. The determination of phytanic acid and phytol in certain foods and the application of this knowledge to the choice of suitable convenience foods for patients with Refsum's disease. J Nutr Biochem 1993, 2:158-164.
- [8]Yik WY, Steinberg SJ, Moser AB, Moser HW, Hacia JG: Identification of novel mutations and sequence variation in the Zellweger syndrome spectrum of peroxisome biogenesis disorders. Hum Mutat 2009, 30:E467-E480.
- [9]Brawand D, Soumillon M, Necsulea A, Julien P, Csardi G, Harrigan P, Weier M, Liechti A, Aximu-Petri A, Kircher M, Albert FW, Zeller U, Khaitovich P, Grutzner F, Bergmann S, Nielsen R, Paabo S, Kaessmann H: The evolution of gene expression levels in mammalian organs. Nature 2011, 478:343-348.
- [10]Yan G, Zhang G, Fang X, Zhang Y, Li C, Ling F, Cooper DN, Li Q, Li Y, van Gool AJ, Du H, Chen J, Chen R, Zhang P, Huang Z, Thompson JR, Meng Y, Bai Y, Wang J, Zhuo M, Wang T, Huang Y, Wei L, Li J, Wang Z, Hu H, Yang P, Le L, Stenson PD, Li B, et al.: Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Nat Biotechnol 2011, 29:1019-1023.
- [11]Eisenhaber F, Eisenhaber B, Kubina W, Maurer-Stroh S, Neuberger G, Schneider G, Wildpaner M: Prediction of lipid posttranslational modifications and localization signals from protein sequences: big-Pi, NMT and PTS1. Nucleic Acids Res 2003, 31:3631-3634.
- [12]Petriv OI, Tang L, Titorenko VI, Rachubinski RA: A new definition for the consensus sequence of the peroxisome targeting signal type 2. J Mol Biol 2004, 341:119-134.
- [13]Brackenridge S, Wilkie AO, Screaton GR: Efficient use of a 'dead-end' GA 5' splice site in the human fibroblast growth factor receptor genes. EMBO J 2003, 22:1620-1631.
- [14]Yang Z, Wong WS, Nielsen R: Bayes empirical bayes inference of amino acid sites under positive selection. Mol Biol Evol 2005, 22:1107-1118.
- [15]Ventura M, Catacchio CR, Alkan C, Marques-Bonet T, Sajjadian S, Graves TA, Hormozdiari F, Navarro A, Malig M, Baker C, Lee C, Turner EH, Chen L, Kidd JM, Archidiacono N, Shendure J, Wilson RK, Eichler EE: Gorilla genome structural variation reveals evolutionary parallelisms with chimpanzee. Genome Res 2011, 21:1640-1649.
- [16]van den Brink DM, Wanders RJ: Phytanic acid: production from phytol, its breakdown and role in human disease. Cell Mol Life Sci 2006, 63:1752-1765.
- [17]Milton K, McBee RH: Rates of fermentative digestion in the howler monkey, Alouatta palliata (primates: ceboidea). Comp Biochem Physiol A Comp Physiol 1983, 74:29-31.
- [18]Baxter JH: Absorption of chlorophyll phytol in normal man and in patients with Refsum's disease. J Lipid Res 1968, 9:636-641.
- [19]Perry GH, Melsted P, Marioni JC, Wang Y, Bainer R, Pickrell JK, Michelini K, Zehr S, Yoder AD, Stephens M, Pritchard JK, Gilad Y: Comparative RNA sequencing reveals substantial genetic variation in endangered primates. Genome Res 2012, 22:602-610.
- [20]Matile P, Hortensteiner S, Thomas H: Chlorophyll degradation. Annu Rev Plant Physiol Plant Mol Biol 1999, 50:67-95.
- [21]Milton K: A hypothesis to explain the role of meat-eating in human evolution. Evolutionary Anthropology 1999, 8:11-21.
- [22]Finch CE, Stanford CB: Meat-adaptive genes and the evolution of slower aging in humans. Q Rev Biol 2004, 79:3-50.
- [23]Luca F, Perry GH, Di Rienzo A: Evolutionary adaptations to dietary changes. Annu Rev Nutr 2010, 30:291-314.
- [24]Babbitt CC, Warner LR, Fedrigo O, Wall CE, Wray GA: Genomic signatures of diet-related shifts during human origins. Proc Biol Sci 2011, 278:961-969.
- [25]Moser AB, Steinberg SJ, Watkins PA, Moser HW, Ramaswamy K, Siegmund KD, Lee DR, Ely JJ, Ryder OA, Hacia JG: Human and great ape red blood cells differ in plasmalogen levels and composition. Lipids Health Dis 2011, 10:101. BioMed Central Full Text