期刊论文详细信息
Journal of Experimental & Clinical Cancer Research
Up-regulation of long noncoding RNA MALAT1 contributes to proliferation and metastasis in esophageal squamous cell carcinoma
Kang Yang1  Yun Bai2  Kai Wang2  Hui Meng2  Deli Tan1  Yuanyuan Wu2  Liwen Hu1 
[1] Department of Cardiothoracic Surgery, Southwest Hospital, Third Military Medical University, Gaotanyan St., Shapingba District, Chongqing, People’s Republic of China;Department of Medical Genetics, College of Basic Medical Science, Third Military Medical University, Gaotanyan St., Shapingba District, Chongqing, People’s Republic of China
关键词: Cell cycle arrest;    Copy number;    Esophageal cancer;    MALAT1;    Long noncoding RNA;   
Others  :  1133641
DOI  :  10.1186/s13046-015-0123-z
 received in 2014-11-02, accepted in 2015-01-04,  发布年份 2015
【 摘 要 】

Background

Metastasis Associated Lung Adenocarcinoma Transcript 1 (MALAT1) has been demonstrated to be an important player in various human malignancies; it is thought to promote tumor growth by cell cycle regulating. However, the roles of MALAT1 in esophageal squamous cell carcinoma(ESCC), and the mechanisms involved in cell cycle regulation remain poorly understood. Moreover, the factors contributing to its up-regulation in tumor tissues are still largely unclear.

Methods

Expression of MALAT1 was determined from cell lines and clinical samples by qRT-PCR. The effects of MALAT1 knockdown on cell proliferation, cell cycle, apoptosis, migration, and invasion were evaluated by in vitro and in vivo assays. The potential protein expression changes were investigated by Western-blotting. The methylation status of the CpG island in the MALAT1 promoter was explored by bisulfite sequencing, while the copy numbers in tumor tissues and blood samples were detected by a well-established AccuCopyTM method.

Results

MALAT1 was over-expressed in 46.3% of ESCC tissues, mostly in the high-stage tumor samples. Enhanced MALAT1 expression levels were positively correlated with clinical stages, primary tumor size, and lymph node metastasis. Inhibition of MALAT1 suppressed tumor proliferation in vitro and in vivo, as well as the migratory and invasive capacity. MALAT1 depletion also induced G2/M phase arrest and increased the percentage of apoptotic cells. Western-blotting results implicated that the ATM-CHK2 pathway which is associated with G2/M arrest was phosphorylated by MALAT1 knockdown. No effects of CpG island methylation status on MALAT1 expression were found, whereas amplification of MALAT1 was found in 22.2% of tumor tissues, which correlated significantly with its over-expression. However, neither association between tissue copy number amplification and germline copy number variation, nor correlation between germline copy number variation and ESCC risk were identified in the case–control study.

Conclusions

Our data suggest that MALAT1 serves as an oncogene in ESCC, and it regulates ESCC growth by modifying the ATM-CHK2 pathway. Moreover, amplification of MALAT1 in tumor tissues may play an important role for its up-regulation, and it seems that the gene amplification in tumor tissues emerges during ESCC progression, but is not derived from germline origins.

【 授权许可】

   
2015 Hu et al.; licensee Biomed Central.

附件列表
Files Size Format View
Figure 6. 65KB Image download
Figure 5. 32KB Image download
Figure 4. 48KB Image download
Figure 3. 135KB Image download
Figure 2. 49KB Image download
Figure 1. 62KB Image download
【 图 表 】

Figure 1.

Figure 2.

Figure 3.

Figure 4.

Figure 5.

Figure 6.

【 参考文献 】
  • [1]Wang B, Yin BL, He B, Chen C, Zhao M, Zhang W, et al.: Overexpression of DNA damage-induced 45 alpha gene contributes to esophageal squamous cell cancer by promoter hypomethylation. J Exp Clin Cancer Res 2012, 31:11. BioMed Central Full Text
  • [2]Demeester SR: Epidemiology and biology of esophageal cancer. Gastrointest Cancer Res 2009, 3:S2-5.
  • [3]Song H, Xu B, Yi J: Clinical significance of stanniocalcin-1 detected in peripheral blood and bone marrow of esophageal squamous cell carcinoma patients. J Exp Clin Cancer Res 2012, 31:35. BioMed Central Full Text
  • [4]Wahlestedt C: Targeting long non-coding RNA to therapeutically upregulate gene expression. Nat Rev Drug Discov 2013, 12:433-46.
  • [5]Rinn JL, Kertesz M, Wang JK, Squazzo SL, Xu X, Brugmann SA, et al.: Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs. Cell 2007, 129:1311-23.
  • [6]Dimond A, Fraser P: Molecular biology. Long noncoding RNAs Xist in three dimensions. Science 2013, 341:720-1.
  • [7]Denzler R, Agarwal V, Stefano J, Bartel DP, Stoffel M: Assessing the ceRNA hypothesis with quantitative measurements of miRNA and target abundance. Mol Cell 2014, 54:766-76.
  • [8]Shi X, Sun M, Liu H, Yao Y, Song Y: Long non-coding RNAs: a new frontier in the study of human diseases. Cancer Lett 2013, 339:159-66.
  • [9]Ji P, Diederichs S, Wang W, Boing S, Metzger R, Schneider PM, et al.: MALAT-1, a novel noncoding RNA, and thymosin beta4 predict metastasis and survival in early-stage non-small cell lung cancer. Oncogene 2003, 22:8031-41.
  • [10]Zheng HT, Shi DB, Wang YW, Li XX, Xu Y, Tripathi P, et al.: High expression of lncRNA MALAT1 suggests a biomarker of poor prognosis in colorectal cancer. Int J Clin Exp Pathol 2014, 7:3174-81.
  • [11]Gutschner T, Hammerle M, Eissmann M, Hsu J, Kim Y, Hung G, et al.: The noncoding RNA MALAT1 is a critical regulator of the metastasis phenotype of lung cancer cells. Cancer Res 2013, 73:1180-9.
  • [12]Han Y, Liu Y, Nie L, Gui Y, Cai Z: Inducing cell proliferation inhibition, apoptosis, and motility reduction by silencing long noncoding ribonucleic acid metastasis-associated lung adenocarcinoma transcript 1 in urothelial carcinoma of the bladder. Urology 2013, 81:209. e201-207
  • [13]Wang J, Su L, Chen X, Li P, Cai Q, Yu B, et al.: MALAT1 promotes cell proliferation in gastric cancer by recruiting SF2/ASF. Biomed Pharmacother 2014, 68:557-64.
  • [14]West JA, Davis CP, Sunwoo H, Simon MD, Sadreyev RI, Wang PI, et al.: The long noncoding RNAs NEAT1 and MALAT1 bind active chromatin sites. Mol Cell 2014, 55:791-802.
  • [15]Tripathi V, Ellis JD, Shen Z, Song DY, Pan Q, Watt AT, et al.: The nuclear-retained noncoding RNA MALAT1 regulates alternative splicing by modulating SR splicing factor phosphorylation. Mol Cell 2010, 39:925-38.
  • [16]Kuo IY, Wu CC, Chang JM, Huang YL, Lin CH, Yan JJ, et al.: Low SOX17 expression is a prognostic factor and drives transcriptional dysregulation and esophageal cancer progression. Int J Cancer 2014, 135:563-73.
  • [17]Tripathi V, Shen Z, Chakraborty A, Giri S, Freier SM, Wu X, et al.: Long noncoding RNA MALAT1 controls cell cycle progression by regulating the expression of oncogenic transcription factor B-MYB. PLoS Genet 2013, 9:e1003368.
  • [18]Yang F, Yi F, Han X, Du Q, Liang Z: MALAT-1 interacts with hnRNP C in cell cycle regulation. FEBS Lett 2013, 587:3175-81.
  • [19]Tee AE, Ling D, Nelson C, Atmadibrata B, Dinger ME, Xu N, et al.: The histone demethylase JMJD1A induces cell migration and invasion by up-regulating the expression of the long noncoding RNA MALAT1. Oncotarget 2014, 5:1793-804.
  • [20]Fan Y, Shen B, Tan M, Mu X, Qin Y, Zhang F, et al.: TGF-beta-induced upregulation of malat1 promotes bladder cancer metastasis by associating with suz12. Clin Cancer Res 2014, 20:1531-41.
  • [21]Han Y, Liu Y, Zhang H, Wang T, Diao R, Jiang Z, et al.: Hsa-miR-125b suppresses bladder cancer development by down-regulating oncogene SIRT7 and oncogenic long non-coding RNA MALAT1. FEBS Lett 2013, 587:3875-82.
  • [22]Leucci E, Patella F, Waage J, Holmstrom K, Lindow M, Porse B, et al.: microRNA-9 targets the long non-coding RNA MALAT1 for degradation in the nucleus. Sci Rep 2013, 3:2535.
  • [23]Lee EJ, Lee BB, Han J, Cho EY, Shim YM, Park J, et al.: CpG island hypermethylation of E-cadherin (CDH1) and integrin alpha4 is associated with recurrence of early stage esophageal squamous cell carcinoma. Int J Cancer 2008, 123:2073-9.
  • [24]Ling ZQ, Li P, Ge MH, Zhao X, Hu FJ, Fang XH, et al.: Hypermethylation-modulated down-regulation of CDH1 expression contributes to the progression of esophageal cancer. Int J Mol Med 2011, 27:625-35.
  • [25]Du R, Lu C, Jiang Z, Li S, Ma R, An H, et al.: Efficient typing of copy number variations in a segmental duplication-mediated rearrangement hotspot using multiplex competitive amplification. J Hum Genet 2012, 57:545-51.
  • [26]Li W, Zheng J, Deng J, You Y, Wu H, Li N, et al.: Increased levels of the long intergenic non-protein coding RNA POU3F3 promote DNA methylation in esophageal squamous cell carcinoma cells. Gastroenterology 2014, 146:1714-26. e1715
  • [27]Li X, Wu Z, Mei Q, Guo M, Fu X, Han W: Long non-coding RNA HOTAIR, a driver of malignancy, predicts negative prognosis and exhibits oncogenic activity in oesophageal squamous cell carcinoma. Br J Cancer 2013, 109:2266-78.
  • [28]Xie HW, Wu QQ, Zhu B, Chen FJ, Ji L, Li SQ, et al.: Long noncoding RNA SPRY4-IT1 is upregulated in esophageal squamous cell carcinoma and associated with poor prognosis. Tumour Biol 2014, 35:7743-54.
  • [29]Yang L, Lin C, Liu W, Zhang J, Ohgi KA, Grinstein JD, et al.: ncRNA- and Pc2 methylation-dependent gene relocation between nuclear structures mediates gene activation programs. Cell 2011, 147:773-88.
  • [30]Anko ML, Neugebauer KM: Long noncoding RNAs add another layer to pre-mRNA splicing regulation. Mol Cell 2010, 39:833-4.
  • [31]Ying L, Chen Q, Wang Y, Zhou Z, Huang Y, Qiu F: Upregulated MALAT-1 contributes to bladder cancer cell migration by inducing epithelial-to-mesenchymal transition. Mol Biosyst 2012, 8:2289-94.
  • [32]Zhao Z, Chen C, Liu Y, Wu C: 17beta-Estradiol treatment inhibits breast cell proliferation, migration and invasion by decreasing MALAT-1 RNA level. Biochem Biophys Res Commun 2014, 445:388-93.
  • [33]Ren S, Liu Y, Xu W, Sun Y, Lu J, Wang F, et al.: Long noncoding RNA MALAT-1 is a new potential therapeutic target for castration resistant prostate cancer. J Urol 2013, 190:2278-87.
  • [34]Matsuoka S, Huang M, Elledge SJ: Linkage of ATM to cell cycle regulation by the Chk2 protein kinase. Science 1998, 282:1893-7.
  • [35]Bakkenist CJ, Kastan MB: DNA damage activates ATM through intermolecular autophosphorylation and dimer dissociation. Nature 2003, 421:499-506.
  • [36]Dodson GE, Shi Y, Tibbetts RS: DNA replication defects, spontaneous DNA damage, and ATM-dependent checkpoint activation in replication protein A-deficient cells. J Biol Chem 2004, 279:34010-4.
  • [37]Iwahori S, Kohmon D, Kobayashi J, Tani Y, Yugawa T, Komatsu K, et al.: ATM regulates Cdt1 stability during the unperturbed S phase to prevent re-replication. Cell Cycle 2014, 13:471-81.
  • [38]Ahn JY, Schwarz JK, Piwnica-Worms H, Canman CE: Threonine 68 phosphorylation by ataxia telangiectasia mutated is required for efficient activation of Chk2 in response to ionizing radiation. Cancer Res 2000, 60:5934-6.
  • [39]Thanasoula M, Escandell JM, Suwaki N, Tarsounas M: ATM/ATR checkpoint activation downregulates CDC25C to prevent mitotic entry with uncapped telomeres. EMBO J 2012, 31:3398-410.
  • [40]Khammanivong A, Wang C, Sorenson BS, Ross KF, Herzberg MC: S100A8/A9 (calprotectin) negatively regulates G2/M cell cycle progression and growth of squamous cell carcinoma. PLoS One 2013, 8:e69395.
  • [41]Shiovitz S, Bertagnolli MM, Renfro LA, Nam E, Foster NR, Dzieciatkowski S, et al.: CpG island methylator phenotype is associated with response to adjuvant irinotecan-based therapy for stage III colon cancer. Gastroenterology 2014, 147:637-45.
  • [42]Shi ZZ, Shang L, Jiang YY, Hao JJ, Zhang Y, Zhang TT, et al.: Consistent and differential genetic aberrations between esophageal dysplasia and squamous cell carcinoma detected by array comparative genomic hybridization. Clin Cancer Res 2013, 19:5867-78.
  • [43]Ying J, Shan L, Li J, Zhong L, Xue L, Zhao H, et al.: Genome-wide screening for genetic alterations in esophageal cancer by aCGH identifies 11q13 amplification oncogenes associated with nodal metastasis. PLoS One 2012, 7:e39797.
  • [44]Takahashi Y, Sawada G, Kurashige J, Uchi R, Matsumura T, Ueo H, et al.: Amplification of PVT-1 is involved in poor prognosis via apoptosis inhibition in colorectal cancers. Br J Cancer 2014, 110:164-71.
  • [45]Hu Y, Wang J, Qian J, Kong X, Tang J, Wang Y, et al.: Long non-coding RNA GAPLINC regulates CD44-dependent cell invasiveness and associates with poor prognosis of gastric cancer. Cancer Res 2014, 74:6890-902.
  • [46]Liu B, Yang L, Huang B, Cheng M, Wang H, Li Y, et al.: A functional copy-number variation in MAPKAPK2 predicts risk and prognosis of lung cancer. Am J Hum Genet 2012, 91:384-90.
  • [47]Huang L, Yu D, Wu C, Zhai K, Jiang G, Cao G, et al.: Copy number variation at 6q13 functions as a long-range regulator and is associated with pancreatic cancer risk. Carcinogenesis 2012, 33:94-100.
  • [48]Conrad DF, Pinto D, Redon R, Feuk L, Gokcumen O, Zhang Y, et al.: Origins and functional impact of copy number variation in the human genome. Nature 2010, 464:704-12.
  • [49]Park H, Kim JI, Ju YS, Gokcumen O, Mills RE, Kim S, et al.: Discovery of common Asian copy number variants using integrated high-resolution array CGH and massively parallel DNA sequencing. Nat Genet 2010, 42:400-5.
  文献评价指标  
  下载次数:0次 浏览次数:3次