BMC Genetics | |
ENU mutagenesis reveals that Notchless homolog 1 (Drosophila) affects Cdkn1a and several members of the Wnt pathway during murine pre-implantation development | |
Monica J Justice1  Joseph P Garner5  Melissa J Cramer2  Katherine M Baumgarner2  Chiao-Ling Lo3  Amy C Lossie4  | |
[1] Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA;Department of Animal Sciences, Purdue University, West Lafayette, IN, 47907, USA;PULSe Interdisciplinary Life Science Program, Purdue University, West Lafayette, IN, USA;Department of Medicine, Indiana University School of Medicine, Indianapolis, IN, USA;Department of Comparative Medicine, Stanford University, Palo Alto, CA, USA | |
关键词: Embryonic lethal; Mouse; Pre-implantation development; ENU mutagenesis; Cdkn1a; Wnt; Notch; Notchless homolog 1 (Drosophila); | |
Others : 1087434 DOI : 10.1186/1471-2156-13-106 |
|
received in 2012-08-10, accepted in 2012-11-24, 发布年份 2012 | |
【 摘 要 】
Background
Our interests lie in determining the genes and genetic pathways that are important for establishing and maintaining maternal-fetal interactions during pregnancy. Mutation analysis targeted to a 34 Mb domain flanked by Trp53 and Wnt3 demonstrates that this region of mouse chromosome 11 contains a large number of essential genes. Two mutant alleles (l11Jus1 and l11Jus4), which fall into the same complementation group, survive through implantation but fail prior to gastrulation.
Results
Through a positional cloning strategy, we discovered that these homozygous mutant alleles contain non-conservative missense mutations in the Notchless homolog 1 (Drosophila) (Nle1) gene. NLE1 is a member of the large WD40-repeat protein family, and is thought to signal via the canonical NOTCH pathway in vertebrates. However, the phenotype of the Nle1 mutant mice is much more severe than single Notch receptor mutations or even in animals in which NOTCH signaling is blocked. To test the hypothesis that NLE1 functions in multiple signaling pathways during pre-implantation development, we examined expression of multiple Notch downstream target genes, as well as select members of the Wnt pathway in wild-type and mutant embryos. We did not detect altered expression of any primary members of the Notch pathway or in Notch downstream target genes. However, our data reveal that Cdkn1a, a NOTCH target, was upregulated in Nle1 mutants, while several members of the Wnt pathway are downregulated. In addition, we found that Nle1 mutant embryos undergo caspase-mediated apoptosis as hatched blastocysts, but not as morulae or blastocysts.
Conclusions
Taken together, these results uncover potential novel functions for NLE1 in the WNT and CDKN1A pathways during embryonic development in mammals.
【 授权许可】
2012 Lossie et al.; licensee BioMed Central Ltd.
【 预 览 】
Files | Size | Format | View |
---|---|---|---|
20150116030229322.pdf | 1333KB | download | |
Figure 5. | 64KB | Image | download |
Figure 4. | 164KB | Image | download |
Figure 3. | 601KB | Image | download |
Figure 2. | 95KB | Image | download |
Figure 1. | 77KB | Image | download |
【 图 表 】
Figure 1.
Figure 2.
Figure 3.
Figure 4.
Figure 5.
【 参考文献 】
- [1]Boles MK, Wilkinson BM, Wilming LG, Liu B, Probst FJ, Harrow J, Grafham D, Hentges KE, Woodward LP, Maxwell A, et al.: Discovery of candidate disease genes in ENU-induced mouse mutants by large-scale sequencing, including a splice-site mutation in nucleoredoxin. PLoS Genet 2009, 5(12):e1000759.
- [2]Hentges KE, Pollock DD, Liu B, Justice MJ: Regional variation in the density of essential genes in mice. PLoS Genet 2007, 3(5):e72.
- [3]Hentges KE, Nakamura H, Furuta Y, Yu Y, Thompson DM, O'Brien W, Bradley A, Justice MJ: Novel lethal mouse mutants produced in balancer chromosome screens. Gene Expr Pattern: GEP 2006, 6(6):653-665.
- [4]Kile BT, Hentges KE, Clark AT, Nakamura H, Salinger AP, Liu B, Box N, Stockton DW, Johnson RL, Behringer RR, et al.: Functional genetic analysis of mouse chromosome 11. Nature 2003, 425(6953):81-86.
- [5]Cormier S, Le Bras S, Souilhol C, Vandormael-Pournin S, Durand B, Babinet C, Baldacci P, Cohen-Tannoudji M: The murine ortholog of notchless, a direct regulator of the notch pathway in Drosophila melanogaster, is essential for survival of inner cell mass cells. Mol Cell Biol 2006, 26(9):3541-3549.
- [6]Royet J, Bouwmeester T, Cohen SM: Notchless encodes a novel WD40-repeat-containing protein that modulates Notch signaling activity. EMBO J 1998, 17(24):7351-7360.
- [7]Good K, Ciosk R, Nance J, Neves A, Hill RJ, Priess JR: The T-box transcription factors TBX-37 and TBX-38 link GLP-1/Notch signaling to mesoderm induction in C. elegans embryos. Development 2004, 131(9):1967-1978.
- [8]Sherwood DR, McClay DR: LvNotch signaling mediates secondary mesenchyme specification in the sea urchin embryo. Development 1999, 126(8):1703-1713.
- [9]Sherwood DR, McClay DR: LvNotch signaling plays a dual role in regulating the position of the ectoderm-endoderm boundary in the sea urchin embryo. Development 2001, 128(12):2221-2232.
- [10]Contakos SP, Gaydos CM, Pfeil EC, McLaughlin KA: Subdividing the embryo: a role for Notch signaling during germ layer patterning in Xenopus laevis. Dev Biol 2005, 288(1):294-307.
- [11]Conlon RA, Reaume AG, Rossant J: Notch1 is required for the coordinate segmentation of somites. Development 1995, 121(5):1533-1545.
- [12]Hamada Y, Kadokawa Y, Okabe M, Ikawa M, Coleman JR, Tsujimoto Y: Mutation in ankyrin repeats of the mouse Notch2 gene induces early embryonic lethality. Development 1999, 126(15):3415-3424.
- [13]Krebs LT, Xue Y, Norton CR, Sundberg JP, Beatus P, Lendahl U, Joutel A, Gridley T: Characterization of Notch3-deficient mice: normal embryonic development and absence of genetic interactions with a Notch1 mutation. Genesis 2003, 37(3):139-143.
- [14]McCright B, Gao X, Shen L, Lozier J, Lan Y, Maguire M, Herzlinger D, Weinmaster G, Jiang R, Gridley T: Defects in development of the kidney, heart and eye vasculature in mice homozygous for a hypomorphic Notch2 mutation. Development 2001, 128(4):491-502.
- [15]Swiatek PJ, Lindsell CE, del Amo FF, Weinmaster G, Gridley T: Notch1 is essential for postimplantation development in mice. Genes Dev 1994, 8(6):707-719.
- [16]Hrabe de Angelis M, McIntyre J 2, Gossler A: Maintenance of somite borders in mice requires the Delta homologue DII1. Nature 1997, 386(6626):717-721.
- [17]Krebs LT, Shutter JR, Tanigaki K, Honjo T, Stark KL, Gridley T: Haploinsufficient lethality and formation of arteriovenous malformations in Notch pathway mutants. Genes Dev 2004, 18(20):2469-2473.
- [18]Krebs LT, Xue Y, Norton CR, Shutter JR, Maguire M, Sundberg JP, Gallahan D, Closson V, Kitajewski J, Callahan R, et al.: Notch signaling is essential for vascular morphogenesis in mice. Genes Dev 2000, 14(11):1343-1352.
- [19]Dunwoodie SL, Clements M, Sparrow DB, Sa X, Conlon RA, Beddington RS: Axial skeletal defects caused by mutation in the spondylocostal dysplasia/pudgy gene Dll3 are associated with disruption of the segmentation clock within the presomitic mesoderm. Development 2002, 129(7):1795-1806.
- [20]Jiang R, Lan Y, Chapman HD, Shawber C, Norton CR, Serreze DV, Weinmaster G, Gridley T: Defects in limb, craniofacial, and thymic development in Jagged2 mutant mice. Genes Dev 1998, 12(7):1046-1057.
- [21]Jiang YJ, Smithers L, Lewis J: Vertebrate segmentation: the clock is linked to Notch signalling. Curr Biol: CB 1998, 8(24):R868-R871.
- [22]Kopan R, Ilagan MXG: The canonical Notch signaling pathway: unfolding the activation mechanism. Cell 2009, 137(2):216-233.
- [23]Schwanbeck R, Martini S, Bernoth K, Just U: The Notch signaling pathway: Molecular basis of cell context dependency. Eur J Cell Biol 2011, 90(6–7):572-581.
- [24]Shi S, Stanley P: Evolutionary origins of Notch signaling in early development. Cell Cycle 2006, 5(3):274-278.
- [25]Shi S, Stahl M, Lu L, Stanley P: Canonical Notch signaling is dispensable for early cell fate specifications in mammals. Mol Cell Biol 2005, 25(21):9503-9508.
- [26]Shi S, Stanley P: Protein O-fucosyltransferase 1 is an essential component of Notch signaling pathways. Proc Natl Acad Sci USA 2003, 100(9):5234-5239.
- [27]Donoviel DB, Hadjantonakis AK, Ikeda M, Zheng H, Hyslop PS, Bernstein A: Mice lacking both presenilin genes exhibit early embryonic patterning defects. Genes Dev 1999, 13(21):2801-2810.
- [28]Oka C, Nakano T, Wakeham A, de la Pompa JL, Mori C, Sakai T, Okazaki S, Kawaichi M, Shiota K, Mak TW, et al.: Disruption of the mouse RBP-J kappa gene results in early embryonic death. Development 1995, 121(10):3291-3301.
- [29]Souilhol C, Cormier S, Tanigaki K, Babinet C, Cohen-Tannoudji M: RBP-Jkappa-dependent notch signaling is dispensable for mouse early embryonic development. Mol Cell Biol 2006, 26(13):4769-4774.
- [30]Cormier S, Vandormael-Pournin S, Babinet C, Cohen-Tannoudji M: Developmental expression of the Notch signaling pathway genes during mouse preimplantation development. Gene Expr Patterns 2004, 4(6):713-717.
- [31]Zheng B, Sage M, Cai WW, Thompson DM, Tavsanli BC, Cheah YC, Bradley A: Engineering a balancer chromosome in the mouse. Nat Genet 1999, 22(4):375-378.
- [32]Hentges KE, Justice MJ: Checks and balancers: balancer chromosomes to facilitate genome annotation. Trends Genet 2004, 20(6):252-259.
- [33]Noveroske JK, Lai L, Gaussin V, Northrop JL, Nakamura H, Hirschi KK, Justice MJ: Quaking is essential for blood vessel development. Genesis 2002, 32(3):218-230.
- [34]Livak KJ, Schmittgen TD: Analysis of relative gene expression data using real-time quantitative PCR and the 2(−Delta Delta C(T)) Method. Methods 2001, 25(4):402-408.
- [35]Slee EA, Adrain C, Martin SJ: Serial killers: ordering caspase activation events in apoptosis. Cell Death Differ 1999, 6(11):1067-1074.
- [36]Bedner E, Smolewski P, Amstad P, Darzynkiewicz Z: Activation of caspases measured in situ by binding of fluorochrome-labeled inhibitors of caspases (FLICA): correlation with DNA fragmentation. Exp Cell Res 2000, 259(1):308-313.
- [37]Tang F, Barbacioru C, Nordman E, Li B, Xu N, Bashkirov VI, Lao K, Surani MA: RNA-Seq analysis to capture the transcriptome landscape of a single cell. Nat Protoc 2010, 5(3):516-535.
- [38]Lo C-L, Shen F, Baumgarner K, Cramer MJ, Lossie AC: Identification of 129S6/SvEvTac-Specific polymorphisms on mouse chromosome 11. DNA Cell Biol 2012, 31(3):402-414.
- [39]Livingstone CD, Barton GJ: Protein sequence alignments: a strategy for the hierarchical analysis of residue conservation. Comput Appl Biosci 1993, 9(6):745-756.
- [40]Blake JA, Bult CJ, Kadin JA, Richardson JE, Eppig JT: The Mouse Genome Database (MGD): premier model organism resource for mammalian genomics and genetics. Nucleic Acids Res 2011, 39(Database issue):D842-D848.
- [41]Carninci P, Hayashizaki Y: High-efficiency full-length cDNA cloning. Methods Enzymol 1999, 303:19-44.
- [42]Kent WJ: BLAT–the BLAST-like alignment tool. Genome Res 2002, 12(4):656-664.
- [43]Brugarolas J, Chandrasekaran C, Gordon JI, Beach D, Jacks T, Hannon GJ: Radiation-induced cell cycle arrest compromised by p21 deficiency. Nature 1995, 377(6549):552-557.
- [44]Deng C, Zhang P, Harper JW, Elledge SJ, Leder P: Mice lacking p21CIP1/WAF1 undergo normal development, but are defective in G1 checkpoint control. Cell 1995, 82(4):675-684.
- [45]Gartel AL: The conflicting roles of the cdk inhibitor p21(CIP1/WAF1) in apoptosis. Leuk Res 2005, 29(11):1237-1238.
- [46]Couso JP, Martinez Arias A: Notch is required for wingless signaling in the epidermis of Drosophila. Cell 1994, 79(2):259-272.
- [47]Hing HK, Sun X, Artavanis-Tsakonas S: Modulation of wingless signaling by Notch in Drosophila. Mech Dev 1994, 47(3):261-268.
- [48]Matsuno K, Diederich RJ, Go MJ, Blaumueller CM, Artavanis-Tsakonas S: Deltex acts as a positive regulator of Notch signaling through interactions with the Notch ankyrin repeats. Development 1995, 121(8):2633-2644.
- [49]Abbas T, Dutta A: p21 in cancer: intricate networks and multiple activities. Nat Rev Cancer 2009, 9(6):400-414.
- [50]Moldovan GL, Pfander B, Jentsch S: PCNA, the maestro of the replication fork. Cell 2007, 129(4):665-679.
- [51]Zhu W, Abbas T, Dutta A: DNA replication and genomic instability. Adv Exp Med Biol 2005, 570:249-279.
- [52]Yamakuchi M, Lowenstein CJ: MiR-34, SIRT1 and p53: the feedback loop. Cell Cycle 2009, 8(5):712-715.
- [53]Gurley KE, Moser R, Gu Y, Hasty P, Kemp CJ: DNA-PK suppresses a p53-independent apoptotic response to DNA damage. EMBO Rep 2009, 10(1):87-93.
- [54]Barrow JR, Howell WD, Rule M, Hayashi S, Thomas KR, Capecchi MR, McMahon AP: Wnt3 signaling in the epiblast is required for proper orientation of the anteroposterior axis. Dev Biol 2007, 312(1):312-320.
- [55]Kemp C, Willems E, Abdo S, Lambiv L, Leyns L: Expression of all Wnt genes and their secreted antagonists during mouse blastocyst and postimplantation development. Dev Dyn 2005, 233(3):1064-1075.
- [56]Kemp CR, Willems E, Wawrzak D, Hendrickx M, Agbor Agbor T, Leyns L: Expression of Frizzled5, Frizzled7, and Frizzled10 during early mouse development and interactions with canonical Wnt signaling. Dev Dyn 2007, 236(7):2011-2019.
- [57]Hayashi K, Burghardt RC, Bazer FW, Spencer TE: WNTs in the ovine uterus: potential regulation of periimplantation ovine conceptus development. Endocrinology 2007, 148(7):3496-3506.
- [58]Hayashi K, Erikson DW, Tilford SA, Bany BM, Maclean JA, Rucker EB, Johnson GA, Spencer TE: Wnt genes in the mouse uterus: potential regulation of implantation. Biol Reprod 2009, 80(5):989-1000.
- [59]Miller C, Sassoon DA: Wnt-7a maintains appropriate uterine patterning during the development of the mouse female reproductive tract. Development 1998, 125(16):3201-3211.
- [60]Chantha S-C, Tebbji F, Matton DP: From the notch signaling pathway to ribosome biogenesis. Plant Signal Behav 2007, 2(3):168-170.
- [61]Chantha SC, Emerald BS, Matton DP: Characterization of the plant Notchless homolog, a WD repeat protein involved in seed development. Plant Mol Biol 2006, 62(6):897-912.
- [62]Chantha SC, Matton DP: Underexpression of the plant NOTCHLESS gene, encoding a WD-repeat protein, causes pleitropic phenotype during plant development. Planta 2007, 225(5):1107-1120.
- [63]de la Cruz J, Sanz-Martínez E, Remacha M: The essential WD-repeat protein Rsa4p is required for rRNA processing and intra-nuclear transport of 60S ribosomal subunits. Nucleic Acids Res 2005, 33(18):5728-5739.
- [64]Strain E, Hass B, Banks JA: Characterization of mutations that feminize gametophytes of the fern Ceratopteris. Genetics 2001, 159(3):1271-1281.