期刊论文详细信息
BMC Medical Ethics
Knowing who to trust: exploring the role of ‘ethical metadata’ in mediating risk of harm in collaborative genomics research in Africa
Michael Parker5  Raymond Fitzpatrick3  Dominic P Kwiatkowski4  Kalifa Bojang6  Thomas N Williams2  Jantina de Vries1 
[1] Department of Medicine, University of Cape Town, Anzio Road Observatory, Cape Town 7925, South Africa;Kenya Medical Research Institute (KEMRI)/Wellcome Trust Programme, Centre for Geographic Medicine Research, Coast, Kilifi District Hospital, PO Box 230, Kilifi 80108, Kenya;Nuffield Department of Population Health, University of Oxford, Old Road Campus, Oxford OX3 7LF, UK;Wellcome Trust Sanger Institute, Hinxton, UK;The Ethox Centre, Nuffield Department of Population Health, University of Oxford, Old Road Campus, Oxford OX3 7LF, UK;Medical Research Council Unit, PO Box 273, Banjul, The Gambia
关键词: Ethnic groups;    Ethics;    Secondary use;    Ethnic stigmatisation;    MalariaGEN;    Africa;    Genomics;    Data sharing;   
Others  :  1090115
DOI  :  10.1186/1472-6939-15-62
 received in 2014-02-24, accepted in 2014-07-22,  发布年份 2014
PDF
【 摘 要 】

Background

The practice of making datasets publicly available for use by the wider scientific community has become firmly integrated in genomic science. One significant gap in literature around data sharing concerns how it impacts on scientists’ ability to preserve values and ethical standards that form an essential component of scientific collaborations. We conducted a qualitative sociological study examining the potential for harm to ethnic groups, and implications of such ethical concerns for data sharing. We focused our empirical work on the MalariaGEN Consortium, one of the first international collaborative genomics research projects in Africa.

Methods

We conducted a study in three MalariaGEN project sites in Kenya, the Gambia, and the United Kingdom. The study entailed analysis of project documents and 49 semi-structured interviews with fieldworkers, researchers and ethics committee members.

Results

Concerns about how best to address the potential for harm to ethnic groups in MalariaGEN crystallised in discussions about the development of a data sharing policy. Particularly concerning for researchers was how best to manage the sharing of genomic data outside of the original collaboration. Within MalariaGEN, genomic data is accompanied by information about the locations of sample collection, the limitations of consent and ethics approval, and the values and relations that accompanied sample collection. For interviewees, this information and context were of important ethical value in safeguarding against harmful uses of data, but is not customarily shared with secondary data users. This challenged the ability of primary researchers to protect against harmful uses of ‘their’ data.

Conclusion

We identified three protective mechanisms – trust, the existence of a shared morality, and detailed contextual understanding – which together might play an important role in preventing the use of genomic data in ways that could harm the ethnic groups included in the study. We suggest that the current practice of sharing of datasets as isolated objects rather than as embedded within a particular scientific culture, without regard for the normative context within which samples were collected, may cause ethical tensions to emerge that could have been prevented or addressed had the ‘ethical metadata’ that accompanies genomic data also been shared.

【 授权许可】

   
2014 de Vries et al.; licensee BioMed Central Ltd.

【 预 览 】
附件列表
Files Size Format View
20150128154301468.pdf 231KB PDF download
【 参考文献 】
  • [1]Foster MW, Sharp RR: Share and share alike: deciding how to distribute the scientific and social benefits of genomic data. Nat Rev Genet 2007, 8(8):633-639.
  • [2]Walport M, Brest P: Sharing research data to improve public health. Lancet 2011, 377:538-539.
  • [3]Kaye J: The tension between data sharing and the protection of privacy in genomics research. Annu Rev Genomics Hum Genet 2012, 13(1):415.
  • [4]Lowrance WW, Collins FS: Identifiability in genomic research. Science 2007, 317(5838):600-602.
  • [5]Parker M, Bull SJ, de Vries J, Agbenyega T, Doumbo OK, Kwiatkowski DP: Ethical data release in genome-wide association studies in developing countries. Plos Med 2009, 6(11):e1000143.
  • [6]Harding A, Harper B, Stone D, O’Neill C, Berger P, Harris S, Donatuto J: Conducting research with tribal communities: sovereignty, ethics and data-sharing issues. Environ Health Perspect 2012, 120(1):6-10.
  • [7]Carlson S, Anderson B: What are data? The many kinds of data and their implications for data re-Use. J Comput-Mediat Commun 2007, 12(2):635-651.
  • [8]Kaye J, Heeney C, Hawkins N, de Vries J, Boddington P: Data sharing in genomics: re-shaping scientific practice. Nat Rev Genet 2009, 10:331-335.
  • [9]Grubb AM, Easterbrook SM: On the lack of consensus over the meaning of openness: an empirical study. PLoS One 2011, 6(8):e23420.
  • [10]Piwowar HA: Who shares? Who doesn’t? Factors associated with openly archiving raw research data. Plos One 2011, 6(7):e18657.
  • [11]Zimmerman A: Not by metadata alone: the use of diverse forms of knowledge to locate data for reuse. Int J Digit Libr 2007, 7:5-16.
  • [12]Edwards PN, Mayernik MS, Batcheller AL, Bowker GC, Borgman CL: Science friction: data, metadata, and collaboration. Soc Stu Sci 2011, 41(5):667-690.
  • [13]Faniel IM, Yakel E: Significant properties as contextual metadata. J Lib Met 2011, 11(3–4):155-165.
  • [14]Evans JA, Foster JG: Metaknowledge. Science 2011, 331(6018):721-725.
  • [15]Ramsay M, Tiemessen CT, Choudhury A, Soodyall H: Africa: the next frontier for human disease gene discovery? Hum Mol Genet 2011, 20:R214-R220.
  • [16]Rosenberg NA, Huang L, Jewett EM, Szpiech ZA, Jankovic I, Boehnke M: Genome-wide association studies in diverse populations. Nat Rev Genet 2010, 11(5):356-366.
  • [17]Fujimura JH, Rajagopalan R: Different differences: the use of “genetic ancestry” versus race in biomedical human genetic research. Soc Stu Sci 2011, 41(1):5-30.
  • [18]Teo YY, Small KS, Kwiatkowski DP: Methodological challenges of genome-wide association analysis in Africa. Nat Rev Genet 2010, 11(2):149-160.
  • [19]Tang H, Quertermous T, Rodriguez B, Kardia SL, Zhu X, Brown A, Pankow JS, Province MA, Hunt SC, Boerwinkle E, Schork NJ, Risch NJ: Genetic structure, self-identified race/ethnicity, and confounding in case–control association studies. Am J Hum Genet 2005, 76(2):268-275.
  • [20]Foster M: Analyzing the use of race and ethnicity in biomedical research from a local community perspective. J Law Med Eth 2006, 34(3):508-512.
  • [21]WHO: Genomics and World Health. Geneva: World Health Organisation; 2002.
  • [22]Harmon A: DNA Gatherers Hit Snag: Tribes Don’t Trust Them. New York: New York Times; 2006.
  • [23]McGregor J: Racial, ethnic, and tribal classifications in biomedical research with biological and group harm. Am J Bioeth 2010, 10(9):23.
  • [24]de Vries J, Jallow M, Williams TN, Kwiatkowski D, Parker M, Fitzpatrick R: Investigating the potential for ethnic group harm in collaborative genomics research in Africa: is ethnic stigmatisation likely? Soc Sci Med 2012, 75(8):1400-1407.
  • [25]Clark JP: How to peer review a qualitative manuscript. In Peer Review in Health Sciences. 2nd edition. Edited by Godlee F, Jefferson T. London: BMJ Books; 2003:219-235.
  • [26]Quinn-Patton M: Qualitative Research and Evaluation Methods. Thousand Oaks, CA: Sage Publications; 2002.
  • [27]Mason M: Sample size and saturation in PhD studies using qualitative interviews. Forum: Qualitative Social Research 2010, 11(3):article 8. http://nbn-resolving.de/urn:nbn:de:0114-fqs100387 webcite
  • [28]QSR: NVivo 8. Melbourne, Australia: QSR International Pty Ltd.; 2009.
  • [29]Pisani E, AbouZhar C: Sharing health data: good intentions are not enough. WHO Bulletin 2010, 88:462-466.
  • [30]Molyneux CS, Peshu N, Marsh K: Understanding of informed consent in a low-income setting: three case studies from the Kenyan coast. Soc Sci Med 2004, 59(12):2547-2559.
  • [31]Ndebele P: Conducting biomedical research in Africa - important ethical issues that researchers need to consider. In A Gateway to Biomedical Research in Africa. Edited by Mduluza T. New York: Nova Science Publishers; 2007:9-18.
  • [32]Nyika A, Kilama W, Chilengi R, Tangwa G, Tindana P, Ndebele P, Ikingura J: Composition, training needs and independence of ethics review committees across Africa: are the gate-keepers rising to the emerging challenges? J Med Eth 2009, 35(3):189-193.
  • [33]Tindana P, Bull S, Amenga-Etego L, de Vries J, Aborigo R, Koram K, Kwiatkowski D, Parker M: Seeking consent to genetic and genomic research in a rural Ghanaian setting: a qualitative study of the MalariaGEN experience. BMC Med Eth 2012, 13(1):15.
  • [34]Heeney C, Hawkins N, De Vries J, Boddington P, Kaye J: Assessing the privacy risks of data sharing in genomics. Public Health Genomics 2010, 14(1):17-25.
  • [35]De Vries J, Bull S, Doumbo OK, Ibrahim M, Mercerau-Puijalon O, Kwiatkowski DP, Parker M: Ethical issues in human genomics research in developing countries. BMC Med Eth 2011., 12(5) http://www.biomedcentral.com/1472-6939/12/5 webcite
  • [36]Parker M: Ethical Problems and Genetics Practice. Cambridge: Cambridge University Press; 2013.
  • [37]Anderson JA, Eijkholt M, Illes J: Ethical reproducibility: towards transparent reporting in biomedical research. Nat Methods 2013, 10(9):843.
  文献评价指标  
  下载次数:6次 浏览次数:9次