BMC Medical Genetics | |
Genetic variants associated with circulating MMP1 levels near matrix metalloproteinase genes on chromosome 11q21-22 in Taiwanese: interaction with obesity | |
Yu-Lin Ko5  Yu-Chen Sun1  Jeng-Feng Lin4  Ming-Sheng Teng6  Lung-An Hsu3  Semon Wu2  Hsuan-Li Huang4  | |
[1] Department of Laboratory Medicine, Chang Gung Memorial Hospital, Taipei, Taiwan;Department of Life Science, Chinese Culture University, Taipei, Taiwan;Chang Gung University College of Medicine, Taipei, Taiwan;Department of Internal Medicine, Division of Cardiology, Buddhist Tzu Chi General Hospital, Taipei branch, 289 Jianguo Road, Xindian City, Taipei, 231, Taiwan;School of Medicine, Tzu Chi University, Hualien, Taiwan;Department of Medical Research, Buddhist Tzu Chi General Hospital, Taipei branch, Taipei, Taiwan | |
关键词: Interaction; Haplotype; Polymorphism; Genetic association study; Matrix metalloproteinase 1; | |
Others : 1177724 DOI : 10.1186/1471-2350-14-30 |
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received in 2012-10-04, accepted in 2013-02-11, 发布年份 2013 | |
【 摘 要 】
Background
MMP1 is implicated in the pathogenesis of atherothrombotic cardiovascular disease. We aimed to elucidate genetic determinants of inflammatory marker levels, including circulating MMP1, in Taiwanese, and their association with obesity.
Methods
Five genetic polymorphisms around matrix metalloproteinase genes on chromosome 11q21-22 region were genotyped in 519 subjects.
Results
After adjusting for clinical covariates, two polymorphisms were significantly associated with MMP1 levels, rs1799750 and rs495366, using an additive inheritance model (P = 1.5x10-4 and P = 2.57x10-5, respectively). Using dominant model, minor alleles of rs1799750 and rs495366 were associated with higher MMP1 levels (P = 1.3x10-4 and P = 1.95x10-5, respectively). In haplotype analysis, two haplotypes inferred from five SNPs (A2GATA and A1GATG) were associated with MMP1 levels (P = 5x10-4 and P = 8.47x10-5, respectively). Subgroup and interaction analysis revealed an association of rs1799750 and rs495366 with MMP1 levels only in non-obese subjects (P = 6.66x10-6 and P = 4.38x10-5, respectively, and interaction P = 0.008 for rs1799750). Haplotype interaction analysis also showed significant interaction for haplotype A1GATG (interaction P = 0.003).
Conclusions
Genotypes/haplotypes around MMP1 locus are associated with MMP1 levels in Taiwanese. Further, since genotypes/haplotypes near MMP1 locus interact with obesity to set MMP1 levels, genetic determinants for MMP1 level may be different between obese and non-obese individuals.
【 授权许可】
2013 Huang et al; licensee BioMed Central Ltd.
【 预 览 】
Files | Size | Format | View |
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20150504022340138.pdf | 176KB | download |
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