Volume 5 Supplement 7

IUFRO Tree Biotechnology Conference 2011: From Genomes to Integration and Delivery

Meeting abstracts

Edited by Dario Grattapaglia

IUFRO Tree Biotechnology Conference 2011: From Genomes to Integration and Delivery.

Arraial d'Ajuda, Bahia, Brazil26 June - 2 July 2011

Page 1 of 6

IUFRO Tree Biotechnology 2011: "From genomes to integration and delivery"

Authors: Dario Grattapaglia

Citation: BMC Proceedings 2011 5(Suppl 7):A1

Content type: Introduction Published on: 13 September 2011
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Missing heritability and missing Fst of candidate genes: why does gene variation differ from trait variation in trees?

Authors: Antoine Kremer

Citation: BMC Proceedings 2011 5(Suppl 7):I1

Content type: Invited speaker presentation Published on: 13 September 2011
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Population and conservation genomics of forest trees: seeing the forest for the trees

Authors: Andrew Eckert

Citation: BMC Proceedings 2011 5(Suppl 7):I2

Content type: Invited speaker presentation Published on: 13 September 2011
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Tracing the history of South-American neotropical savannas and seasonally dry forests evidences from comparative phylogeography

Authors: Rosane Collevatti, Suelen Rabelo, Joao Nabout and Jose Diniz-Filho

Citation: BMC Proceedings 2011 5(Suppl 7):I3

Content type: Invited speaker presentation Published on: 13 September 2011
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Genomics-based breeding in forest trees: are we there yet?

Authors: David Neale

Citation: BMC Proceedings 2011 5(Suppl 7):I4

Content type: Invited speaker presentation Published on: 13 September 2011
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Identification of genes and alleles influencing wood development in Eucalyptus

Authors: Simon Southerton, Shannon Dillon and Bala Thumma

Citation: BMC Proceedings 2011 5(Suppl 7):I5

Content type: Invited speaker presentation Published on: 13 September 2011
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Gene mapping in white spruce (P. glauca): QTL and association studies integrating population and expression data

Authors: John MacKay, Brian Boyle, Walid El Kayal, Marie-Claire Namroud, Trevor Doerksen, Janice Cooke, Nathalie Isabel, Jean Beaulieu, Philippe Rigault, Paul Bicho and Jean Bousquet

Citation: BMC Proceedings 2011 5(Suppl 7):I6

Content type: Invited speaker presentation Published on: 13 September 2011
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Capturing and genotyping the genome-wide genetic diversity of trees for association mapping and genomic selection

Authors: Matias Kirst, Márcio Resende, Patricio Munoz and Leandro Neves

Citation: BMC Proceedings 2011 5(Suppl 7):I7

Content type: Invited speaker presentation Published on: 13 September 2011
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Genomic selection in loblolly pine - from lab to field

Authors: Fikret Isik, Ross Whetten, Jaime Zapata-Valenzuela, Funda Ogut and Steven McKeand

Citation: BMC Proceedings 2011 5(Suppl 7):I8

Content type: Invited speaker presentation Published on: 13 September 2011
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Salicylate metabolism in Populus

Authors: Chung Jui Tsai, Wenbing Guo, Benjamin Babst, Batbayar Nyamdari, Yinan Yuan, Raja Payyavula, Han-Yi Chen, Xue Liangjiao, Kate Tay, Vanessa Michelizzi and Scott Harding

Citation: BMC Proceedings 2011 5(Suppl 7):I9

Content type: Invited speaker presentation Published on: 13 September 2011
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Division of labor: multiple and specialized controls of vegetative growth and development in a poplar tree

Authors: Victor Busov, Yiru Chen, Jiqin Gou, Steven Strauss, Yordan Yordanov and Christine Zawaski

Citation: BMC Proceedings 2011 5(Suppl 7):I10

Content type: Invited speaker presentation Published on: 13 September 2011
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Regulation of shoot-system development in Populus

Authors: Amy Brunner, Xiaoyan Sheng, Joesph Edwards, Takeshi Fujino, Chieh-Ting Wang and Stephen DiFazio

Citation: BMC Proceedings 2011 5(Suppl 7):I11

Content type: Invited speaker presentation Published on: 13 September 2011
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The genomics of poplar-rust interactions to improve tree resistance against fungal disease

Authors: Louis-Philippe Hamel, Meriem Benchabane, Ian T Major, Marie-Claude Nicole, Jen Sheen and Armand Séguin

Citation: BMC Proceedings 2011 5(Suppl 7):I12

Content type: Invited speaker presentation Published on: 13 September 2011
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Adaptation of forest trees to climate change

Authors: Christophe Plomion, Ivan Scotti, Sylvain Delzon and Jean-Marc Gion

Citation: BMC Proceedings 2011 5(Suppl 7):I13

Content type: Invited speaker presentation Published on: 13 September 2011
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A systems biology approach to understanding the regulation of lignin biosynthesis

Authors: Vincent Chiang

Citation: BMC Proceedings 2011 5(Suppl 7):I14

Content type: Invited speaker presentation Published on: 13 September 2011
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Ethylene signaling via Ethylene Response Factors (ERFs) modifies wood development in hybrid aspen

Authors: Judith Felten, Jorma Vahala, Jonathan Love, András Gorzsás, Lorenz Gerber, Manoj Kumar, Jaakko Kangasjärvi and Björn Sundberg

Citation: BMC Proceedings 2011 5(Suppl 7):I15

Content type: Invited speaker presentation Published on: 13 September 2011
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How sweet it is – making the most of carbohydrate metabolism

Authors: Shawn Mansfield

Citation: BMC Proceedings 2011 5(Suppl 7):I16

Content type: Invited speaker presentation Published on: 13 September 2011
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From genes towards products and the significance of gene delivery

Authors: Magnus Hertzberg

Citation: BMC Proceedings 2011 5(Suppl 7):I17

Content type: Invited speaker presentation Published on: 13 September 2011
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Hybrids and mini-cutting: a powerful combination that has revolutionized the Eucalyptusclonal forestry

Authors: Teotônio Francisco Assis

Citation: BMC Proceedings 2011 5(Suppl 7):I18

Content type: Invited speaker presentation Published on: 13 September 2011
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Opening the gateway to enhanced Eucalyptus

Authors: Ziv Shani

Citation: BMC Proceedings 2011 5(Suppl 7):I19

Content type: Invited speaker presentation Published on: 13 September 2011
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The Eucalyptus grandisGenome Project: Genome and transcriptome resources for comparative analysis of woody plant biology

Authors: Alexander Myburg, Dario Grattapaglia, Gerald Tuskan, Jerry Jenkins, Jeremy Schmutz, Eshchar Mizrachi, Charles Hefer, Georgios Pappas, Lieven Sterck, Yves Van De Peer, Richard Hayes and Daniel Rokhsar

Citation: BMC Proceedings 2011 5(Suppl 7):I20

Content type: Invited speaker presentation Published on: 13 September 2011
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Populus resequencing: towards genome-wide association studies

Authors: Gerald Tuskan, Gancho Slavov, Steve DiFazio, Wellington Muchero, Ranjan Pryia, Wendy Schackwitz, Joel Martin, Daniel Rokhsar, Robert Sykes, Mark Davis, Michael Studer and Charles Wyman

Citation: BMC Proceedings 2011 5(Suppl 7):I21

Content type: Invited speaker presentation Published on: 13 September 2011
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Eucalyptusresearch in the post-genome era

Authors: Georgios Pappas, Sergio de Alencar, Orzenil B Silva-Junior, Roberto C Togawa, Marilia CR Pappas and Dario Grattapaglia

Citation: BMC Proceedings 2011 5(Suppl 7):I22

Content type: Invited speaker presentation Published on: 13 September 2011
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Science, society and biosafety of a field trial with transgenic biofuel poplars

Authors: Rebecca Van Acker, Véronique Storme, Geert Goeminne, Bart Ivens, René Custers, Dirk Aerts, Wim Soetaert, John Ralph, Nicholas Santoro, Jean-Charles Leplé, Gilles Pilate and Wout Boerjan

Citation: BMC Proceedings 2011 5(Suppl 7):I23

Content type: Invited speaker presentation Published on: 13 September 2011
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Biotech Eucalyptus can sustainably address society’s need for wood: the example of freeze tolerant Eucalyptusin the southeastern U.S

Authors: Maud Hinchee, Chunsheng Zhang, Shujun Chang, MIchael Cunningham, William Hammond and Narender Nehra

Citation: BMC Proceedings 2011 5(Suppl 7):I24

Content type: Invited speaker presentation Published on: 13 September 2011
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Transgenic biotechnology in forestry: what a long strange trip it's been

Authors: Steven H Strauss

Citation: BMC Proceedings 2011 5(Suppl 7):I25

Content type: Invited speaker presentation Published on: 13 September 2011
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Exponential advances in Forest Genetics: the past 25 years and the next 25 weeks

Authors: Ronald Sederoff

Citation: BMC Proceedings 2011 5(Suppl 7):K1

Content type: Keynote lecture presentation Published on: 13 September 2011
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Inferring the evolutionary history of Populus trichocarpa from whole genome resequencing data

Authors: Stephen DiFazio, Gancho Slavov, Eli Rodgers-Melnick, Joel Martin, Wendy Schackwitz, Ranjan Priya and Gerald Tuskan

Citation: BMC Proceedings 2011 5(Suppl 7):O1

Content type: Oral presentation Published on: 13 September 2011
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Genomics of adaptation and wood properties in Populus trichocarpa

Authors: Carl Douglas

Citation: BMC Proceedings 2011 5(Suppl 7):O2

Content type: Oral presentation Published on: 13 September 2011
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Lodgepole pine, jack pine, and their hybrids: molecular markers reveal mountain pine beetle host-range expansion into jack pine of the boreal forest

Authors: Catherine Cullingham, Sophie Dang, Corey Davis, Barry Cooke, David Coltman and Janice Cooke

Citation: BMC Proceedings 2011 5(Suppl 7):O3

Content type: Oral presentation Published on: 13 September 2011
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Geographic shifts in climatically suitable areas and loss of genetic variability under climate change in a neotropical tree

Authors: Jose Alexandre Diniz-Filho, Rosane Collevatti, Lázaro Chaves, Thannya Soares, João Carlos Nabout, Thiago Fernando Rangel, Dayane Melo, Jacqueline Lima and Mariana Telles

Citation: BMC Proceedings 2011 5(Suppl 7):O4

Content type: Oral presentation Published on: 13 September 2011
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Genomic signatures of selection in response to sulfate air pollution in natural populations of red spruce

Authors: Om Rajora and Stanislav Bashalkhanov

Citation: BMC Proceedings 2011 5(Suppl 7):O5

Content type: Oral presentation Published on: 13 September 2011
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Effects of forest fragmentation on the effective and realized gene flow of Neotropical tree species: implications for genetic conservation

Authors: Alexandre Sebbenn

Citation: BMC Proceedings 2011 5(Suppl 7):O6

Content type: Oral presentation Published on: 13 September 2011
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Genetic dissection of transcript, metabolite, growth and wood property traits in an F2 pseudo-backcross pedigree of Eucalyptus grandis x E. urophylla

Authors: Maria Magdalena van Dyk, Anand R K Kullan, Eshchar Mizrachi, Charles A Hefer, L’Zanne Jansen van Rensburg, Timothy J Tschaplinski, Katherine C Cushman, Nancy E Engle, Gerald A Tuskan, Nicoletta Jones, Arnulf Kanzler and Alexander A Myburg

Citation: BMC Proceedings 2011 5(Suppl 7):O7

Content type: Oral presentation Published on: 13 September 2011
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QTL analysis for growth and wood properties across multiple pedigrees and sites in Eucalyptus globulus

Authors: Jules S Freeman, Brad M Potts, Geoff M Downes, Saravanan Thavamanikumar, David J Pilbeam, Corey J Hudson and Rene E Vaillancourt

Citation: BMC Proceedings 2011 5(Suppl 7):O8

Content type: Oral presentation Published on: 13 September 2011
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SNP discovery and association mapping in Eucalyptus pilularis (blackbutt)

Authors: Timothy Sexton, Robert Henry, Chris Harwood, Dane Thomas, Luke McManus, Carolyn Raymond, Michael Henson and Mervyn Shepherd

Citation: BMC Proceedings 2011 5(Suppl 7):O9

Content type: Oral presentation Published on: 13 September 2011
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Comparative genomics of resistance of spruce to the white pine weevil in British Columbia

Authors: Kermit Ritland, Sébastien Verne, Barry Jaquish and Carol Ritland

Citation: BMC Proceedings 2011 5(Suppl 7):O10

Content type: Oral presentation Published on: 13 September 2011
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Using the Eucalyptus genome to understand the evolution of plant secondary metabolites in the Myrtaceae

Authors: Carsten Kulheim, Hamish Webb, Suat Hui Yeoh, Ian Wallis, Gavin Moran and William Foley

Citation: BMC Proceedings 2011 5(Suppl 7):O11

Content type: Oral presentation Published on: 13 September 2011
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Functional variability of two lignification genes in Eucalyptus urophylla

Authors: Eric Mandrou, Frédéric Mortier, Marie Denis, Gilles Chaix, Emilie Villar, Christophe Plomion and Jean-Marc Gion

Citation: BMC Proceedings 2011 5(Suppl 7):O12

Content type: Oral presentation Published on: 13 September 2011
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Genomic selection in tree breeding: testing accuracy of prediction models including dominance effect

Authors: Marie Denis and Jean-Marc Bouvet

Citation: BMC Proceedings 2011 5(Suppl 7):O13

Content type: Oral presentation Published on: 13 September 2011
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Stability of Genomic Selection prediction models across ages and environments

Authors: Marcio FR Resende Jr., Patricio R Muñoz Del Valle, Juan J Acosta, Marcos DV Resende, Dario Grattapaglia and Matias Kirst

Citation: BMC Proceedings 2011 5(Suppl 7):O14

Content type: Oral presentation Published on: 13 September 2011
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Candidate gene-based association mapping of growth and wood quality traits in Eucalyptus globulusLabill

Authors: Saravanan Thavamanikumar, Josquin Tibbits, Luke McManus, Peter Ades, Desmond Stackpole, Sara Hadjigol, René Vaillancourt, Peng Zhu and Gerd Bossinger

Citation: BMC Proceedings 2011 5(Suppl 7):O15

Content type: Oral presentation Published on: 13 September 2011
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Genomic Selection for growth traits in Eucalyptus: accuracy within and across breeding populations

Authors: Dario Grattapaglia, Marcos Deon Vilela Resende, Márcio Ribeiro Resende, Carolina Paola Sansaloni, Cesar Daniel Petroli, Alexandre Alves Missiaggia, Elisabete Keiko Takahashi, Karina Carnielli Zamprogno and Andrzej Kilian

Citation: BMC Proceedings 2011 5(Suppl 7):O16

Content type: Oral presentation Published on: 13 September 2011
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High-throughput targeted SNP discovery using Next Generation Sequencing (NGS) in few selected candidate genes in Eucalyptus camaldulensis

Authors: Prasad Suresh Hendre, Rathinam Kamalakannan, Rathinavelu Rajkumar and Mohan Varghese

Citation: BMC Proceedings 2011 5(Suppl 7):O17

Content type: Oral presentation Published on: 13 September 2011
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Mapping and transcriptomic approches implemented for understanding disease resistance to Phytophthora cinammomi in Castanea sp

Authors: Rita Costa, Carmen Santos, Fábio Tavares, Helena Machado, José Gomes-Laranjo, Thomas Kubisiak and Charles Dana Nelson

Citation: BMC Proceedings 2011 5(Suppl 7):O18

Content type: Oral presentation Published on: 13 September 2011
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Sequence-based breeding; application to unravel traits of the 6F crops: food, feed, fiber, flowers, fuel and fun

Authors: Mark van Haaren

Citation: BMC Proceedings 2011 5(Suppl 7):O19

Content type: Oral presentation Published on: 13 September 2011
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The regulation of quantitative variation of foliar terpenes in medicinal tea tree Melaleuca alternifolia

Authors: Hamish Webb, Kulheim Carsten, Lanfear Rob, John Hamill and William Foley

Citation: BMC Proceedings 2011 5(Suppl 7):O20

Content type: Oral presentation Published on: 13 September 2011
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A roadmap of apical bud formation in white spruce identifies potential regulators of time to bud set

Authors: Janice Cooke, Walid El Kayal, Betty Pelgas, Irina L Zaharia, Suzanne Abrams and Nathalie Isabel

Citation: BMC Proceedings 2011 5(Suppl 7):O21

Content type: Oral presentation Published on: 13 September 2011
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Greenhouse and field evaluation of transgenic poplars with modified gibberellin metabolism and signaling genes

Authors: Venkatesh Viswanath, Cathleen Ma, Elizabeth Etherington, Palitha Dharmawardhana, David W Pearce, Stewart B Rood, Victor B Busov and Steven H Strauss

Citation: BMC Proceedings 2011 5(Suppl 7):O22

Content type: Oral presentation Published on: 13 September 2011
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Enhanced cytokinin signaling stimulates cell proliferation in cambium of Populus

Authors: Juha Immanen, Kaisa Nieminen, Jing Zhang, Rishi Bhalerao and Ykä Helariutta

Citation: BMC Proceedings 2011 5(Suppl 7):O23

Content type: Oral presentation Published on: 13 September 2011
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IUFRO Tree Biotechnology Conference 2011: From Genomes to Integration and Delivery

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