科技报告详细信息
IMPACTS OF BIOFILM FORMATION ON CELLULOSE FERMENTATION
Leschine, Susan
关键词: BACTERIA;    BIOCONVERSION;    BIOMASS;    CARBON;    CELLULASE;    CELLULOSE;    CLOSTRIDIUM;    COMPOST;    DIALYSIS;    ENERGY SOURCES;    FERMENTATION;    FUNCTIONALS;    GENES;    LIFE CYCLE;    MATRICES;    MORPHOLOGICAL CHANGES;    PELLETS;    RESIDUES;    SPECIFICITY;    STRAINS;    SUBSTRATES advanced biofuels;    consolidated bioprocessing;    cellulosic ethanol;    biological conversion of biomass;    biofilms;    biofilms on nutritive surfaces;    biofilm formation on cellulose;    biofilm formation on chitin;    biofilms in biomass decomposition;    cellulose fermentation;    cellulolytic clostridia;    Clostridium phytofermentans;    cellulomonads;    Cellulomonas uda;    thermophilic filamentous cellulolytic microbes;    Thermobifida fusca;    diversity of cellulose-fermenting microbes;    cellulase;    xylanase;    hemicellulose decomposition;    C5 and C6 fermentation;    chitin decomposition;    chitinase;    ChiA;    chitin as a nitrogen source for cellulolytic microbes;   
DOI  :  10.2172/966704
RP-ID  :  DOE/ER/15330-FTR
PID  :  OSTI ID: 966704
Others  :  Other: UM119040
Others  :  GAID1880
Others  :  TRN: US201006%%486
美国|英语
来源: SciTech Connect
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【 摘 要 】

This project addressed four major areas of investigation: i) characterization of formation of Cellulomonas uda biofilms on cellulose; ii) characterization of Clostridium phytofermentans biofilm development; colonization of cellulose and its regulation; iii) characterization of Thermobifida fusca biofilm development; colonization of cellulose and its regulation; and iii) description of the architecture of mature C. uda, C. phytofermentans, and T. fusca biofilms. This research is aimed at advancing understanding of biofilm formation and other complex processes involved in the degradation of the abundant cellulosic biomass, and the biology of the microbes involved. Information obtained from these studies is invaluable in the development of practical applications, such as the single-step bioconversion of cellulose-containing residues to fuels and other bioproducts. Our results have clearly shown that cellulose-decomposing microbes rapidly colonize cellulose and form complex structures typical of biofilms. Furthermore, our observations suggest that, as cells multiply on nutritive surfaces during biofilms formation, dramatic cell morphological changes occur. We speculated that morphological changes, which involve a transition from rod-shaped cells to more rounded forms, might be more apparent in a filamentous microbe. In order to test this hypothesis, we included in our research a study of biofilm formation by T. fusca, a thermophilic cellulolytic actinomycete commonly found in compost. The cellulase system of T. fusca has been extensively detailed through the work of David Wilson and colleagues at Cornell, and also, genome sequence of a T. fusca strain has been determine by the DOE Joint Genome Institute. Thus, T. fusca is an excellent subject for studies of biofilm development and its potential impacts on cellulose degradation. We also completed a study of the chitinase system of C. uda. This work provided essential background information for understanding how C. uda colonizes and degrades insoluble substrates. Major accomplishments of the project include: • Development of media containing dialysis tubing (described by the manufacturer as “regenerated cellulose”) as sole carbon and energy source and a nutritive surface for the growth of cellulolytic bacteria, and development of various microscopic methods to image biofilms on dialysis tubing. • Demonstration that cultures of C. phytofermentans, an obligate anaerobe, C. uda, a facultative aerobe, and T. fusca, a filamentous aerobe, formed microbial communities on the surface of dialysis tubing, which possessed architectural features and functional characteristics typical of biofilms. • Demonstration that biofilm formation on the nutritive surface, cellulose, involves a complex developmental processes, including colonization of dialysis tubing, formation of cell clusters attached to the nutritive surface, cell morphological changes, formation of complex structures embedded in extracellular polymeric matrices, and dispersal of biofilm communities as the nutritive surface is degraded. • Determination of surface specificity and regulatory aspects of biofilm formation by C. phytofermentans, C. uda, and T. fusca. • Demonstration that biofilm formation by T. fusca forms an integral part of the life cycle of this filamentous cellulolytic bacterium, including studies on the role of mycelial pellet formation in the T. fusca life cycle and a comparison of mycelial pellets to surface-attached T. fusca biofilms. • Characterization of T. fusca biofilm EPS, including demonstration of a functional role for EPS constituents. • Correlation of T. fusca developmental life cycle and cellulase gene expression.

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