The identification of complex interactions in epidemiology and toxicology: a simulation study of boosted regression trees

Environmental Health

Research

Lars Lind¹  Erik Lampa²  P Monica Lind²  Anna Bornefalk-Hermansson³ 

[1] Department of Medical Sciences, Cardiovascular Epidemiology, Uppsala University, 75185, Uppsala, Sweden;Department of Medical Sciences, Occupational and Environmental Medicine, Uppsala University, 75185, Uppsala, Sweden;Uppsala Clinical Research Center, Uppsala University Hospital, 75185, Uppsala, Sweden;

关键词: Boosting;    Interactions;    Toxicology;    Epidemiology;   

DOI  :  10.1186/1476-069X-13-57

 received in 2013-10-10, accepted in 2014-06-28,  发布年份 2014

来源: Springer

【 摘 要 】

BackgroundThere is a need to evaluate complex interaction effects on human health, such as those induced by mixtures of environmental contaminants. The usual approach is to formulate an additive statistical model and check for departures using product terms between the variables of interest. In this paper, we present an approach to search for interaction effects among several variables using boosted regression trees.MethodsWe simulate a continuous outcome from real data on 27 environmental contaminants, some of which are correlated, and test the method’s ability to uncover the simulated interactions. The simulated outcome contains one four-way interaction, one non-linear effect and one interaction between a continuous variable and a binary variable. Four scenarios reflecting different strengths of association are simulated. We illustrate the method using real data.ResultsThe method succeeded in identifying the true interactions in all scenarios except where the association was weakest. Some spurious interactions were also found, however. The method was also capable to identify interactions in the real data set.ConclusionsWe conclude that boosted regression trees can be used to uncover complex interaction effects in epidemiological studies.

【 授权许可】

CC BY   
© Lampa et al.; licensee BioMed Central Ltd. 2014