Highlights from the 11th ISCB Student Council Symposium 2015

BMC Bioinformatics

Meeting Abstracts

Pieter Meysman¹  Kris Laukens¹  Bart Cuypers²  Przemysław Szałaj³  Dariusz Plewczynski⁴  Fatemeh Vafaee⁵  Daniel J. Fazakerley⁶  James R. Krycer⁶  Rima Chaudhuri⁶  David E. James⁷  Westa Domanova⁸  Zdenka Kuncic⁸  M. Michael Gromiha⁹  C. Ramakrishnan⁹  Nagarajan Raju⁹  Sonia Pankaj Chothani^1,10  Dan DeBlasio^1,11  Giulia Fiscon^1,12  Lieven Thorrez^1,13  Yves Moreau^1,14  Griet Laenen^1,14  Margherita Francescatto^1,15  Sean J. Humphrey^1,16  Jakob Jespersen^1,17  Alexander Junge^1,18  Masakazu Sekijima^1,19  Giovanni Felici^2,20  Paola Bertolazzi^2,20  Emanuel Weitschek^2,21  Massimo Ciccozzi^2,22  Bart Cuypers^2,23  Maya Berg^2,24  Hideo Imamura^2,24  Jean-Claude Dujardin^2,25  Manu Vanaerschot^2,26  Pengyi Yang^2,27  Katie Wilkins^2,28  R. Gonzalo Parra^2,29  Mehedi Hassan^3,30  Farzana Rahman^3,30  Sander Willems^3,31  Nigel J Burroughs^3,32  Paddy J Slator^3,33  Zhonghui Tang^3,34  Oskar Luo^3,34  Paul Michalski^3,34  Xingwang Li^3,34  Yijun Ruan^3,35  Anupama Jigisha^3,36 

[1] Advanced Database Research and Modeling (ADReM), University of Antwerp, Antwerp, Belgium;Biomedical informatics research center Antwerp (biomina), Antwerp, Belgium;Advanced Database Research and Modeling (ADReM), University of Antwerp, Antwerp, Belgium;Biomedical informatics research center Antwerp (biomina), Antwerp, Belgium;Molecular Parasitology Unit, Department of Biomedical Sciences, Institute of Tropical Medicine, Antwerp, Belgium;Center for Bioinformatics and Data Analysis, Medical University of Bialystok, ᅟ, Poland;I-BioStat, Hasselt University, ᅟ, Belgium;Centre of New Technologies, Warsaw University, ᅟ, Poland;Charles Perkins Centre, The University of Sydney, 2006, ᅟ, NSW, Australia;School of Mathematics and Statistics, The University of Sydney, 2006, ᅟ, NSW, Australia;Charles Perkins Centre, The University of Sydney, 2006, ᅟ, NSW, Australia;School of Molecular Bioscience, The University of Sydney, 2006, ᅟ, NSW, Australia;Charles Perkins Centre, The University of Sydney, 2006, ᅟ, NSW, Australia;School of Molecular Bioscience, The University of Sydney, 2006, ᅟ, NSW, Australia;Sydney Medical School, The University of Sydney, 2006, ᅟ, NSW, Australia;Charles Perkins Centre, The University of Sydney, 2006, ᅟ, NSW, Australia;School of Physics, The University of Sydney, 2006, Sydney, NSW, Australia;Department of Biotechnology, Bhupat and Jyoti Metha School of Biosciences, Indian Institute of Technology Madras, 600036, Chennai, Tamilnadu, India;Department of Biotechnology, Bhupat and Jyoti Metha School of Biosciences, Indian Institute of Technology Madras, 600036, Chennai, Tamilnadu, India;Philips Research North America, 345 Scarborough Road, 10510, Briarcliff Manor, NY, USA;Department of Computer Science, University of Arizona, 84721, Tucson, AZ, USA;Department of Computer, Control and Management Engineering, Sapienza University, 00185, Rome, Italy;Institute for Systems Analysis and Computer Science, National Research Council, 00185, Rome, Italy;Department of Development and Regeneration @ Kulak, KU Leuven, Kortrijk, Belgium;Department of Electrical Engineering (ESAT), STADIUS Center for Dynamical Systems, Signal Processing and Data Analytics, KU Leuven, Leuven, Belgium;iMinds Medical IT Department, Leuven, Belgium;Department of Genome Biology for Neurodegenerative Diseases, German Center for Neurodegenerative Diseases (DZNE) within the Helmholtz Association, ᅟ, Germany;Department of Proteomics and Signal Transduction, Max Planck Institute for Biochemistry, 82152, Martinsried, Germany;Department of Surgery, Massachusetts General Hospital, The Broad Institute of MIT and Harvard, Boston, USA;Department of Systems Biology, Technical University of Denmark, Kemitorvet, Denmark;Department of Veterinary Clinical and Animal Sciences, Center for non-coding RNA in Technology and Health, University of Copenhagen, Copenhagen, Denmark;Global Scientific Information and Computing Center (GSIC), Tokyo Institute of Technology, 2-12-1 Ookayama, Meguro-ku, 152-8550, Tokyo, Japan;Institute for Systems Analysis and Computer Science, National Research Council, 00185, Rome, Italy;Institute for Systems Analysis and Computer Science, National Research Council, 00185, Rome, Italy;Department of Engineering, International University UNINETTUNO, 00186, Rome, Italy;Istituto Superiore di Sanità, 00161, Rome, Italy;Molecular Parasitology Unit (MPU), Institute of Tropical Medicine, Nationalestraat 155, 2000, Antwerp, Belgium;Advanced Database Research and Modeling (ADReM) research group, University of Antwerp, Middelheimlaan 1, 2020, Antwerpen, Belgium;Molecular Parasitology Unit, Department of Biomedical Sciences, Institute of Tropical Medicine, Antwerp, Belgium;Molecular Parasitology Unit, Department of Biomedical Sciences, Institute of Tropical Medicine, Antwerp, Belgium;Department of Biomedical Sciences, University of Antwerp, Antwerp, Belgium;Molecular Parasitology Unit, Department of Biomedical Sciences, Institute of Tropical Medicine, Antwerp, Belgium;Department of Microbiology and Immunology, Columbia University Medical Center, New York, NY, USA;NIH/NIEHS, 27709, ᅟ, NC, USA;Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY, USA;Graduate Field of Computational Biology, Cornell University, Ithaca, NY, USA;Protein Physiology Lab, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina;School of Computing & Mathematics, University of South Wales, Cardiff, UK;Scientific Institute of Public Health (WIV-ISP), Platform of Biotechnology and Molecular Biology (PBB), Brussels, Belgium;Systems Biology Centre, University of Warwick, Senate House, Coventry, UK;Systems Biology Centre, University of Warwick, Senate House, Coventry, UK;Systems Biology Doctoral Training Centre, University of Warwick, Senate House, Coventry, UK;The Jackson Laboratory for Genomic Medicine, Farmington, USA;The Jackson Laboratory for Genomic Medicine, Farmington, USA;Department of Genetics and Genome Sciences, UConn Health, ᅟ, USA;University College Dublin, Dublin, Ireland;

关键词: Visceral Leishmaniasis;    Feature Selection Method;    Frequent Itemset Mining;    Leishmania Donovani;    Student Council;   

DOI  :  10.1186/s12859-016-0901-4

来源: Springer

【 摘 要 】

contentsA1 Highlights from the eleventh ISCB Student Council Symposium 2015Katie Wilkins, Mehedi Hassan, Margherita Francescatto, Jakob Jespersen, R. Gonzalo Parra, Bart Cuypers, Dan DeBlasio, Alexander Junge, Anupama Jigisha, Farzana RahmanO1 Prioritizing a drug’s targets using both gene expression and structural similarityGriet Laenen, Sander Willems, Lieven Thorrez, Yves MoreauO2 Organism specific protein-RNA recognition: A computational analysis of protein-RNA complex structures from different organismsNagarajan Raju, Sonia Pankaj Chothani, C. Ramakrishnan, Masakazu Sekijima; M. Michael GromihaO3 Detection of Heterogeneity in Single Particle Tracking TrajectoriesPaddy J Slator, Nigel J BurroughsO4 3D-NOME: 3D NucleOme Multiscale Engine for data-driven modeling of three-dimensional genome architecturePrzemysław Szałaj, Zhonghui Tang, Paul Michalski, Oskar Luo, Xingwang Li, Yijun Ruan, Dariusz PlewczynskiO5 A novel feature selection method to extract multiple adjacent solutions for viral genomic sequences classificationGiulia Fiscon, Emanuel Weitschek, Massimo Ciccozzi, Paola Bertolazzi, Giovanni FeliciO6 A Systems Biology Compendium for Leishmania donovaniBart Cuypers, Pieter Meysman, Manu Vanaerschot, Maya Berg, Hideo Imamura, Jean-Claude Dujardin, Kris LaukensO7 Unravelling signal coordination from large scale phosphorylation kinetic dataWesta Domanova, James R. Krycer, Rima Chaudhuri, Pengyi Yang, Fatemeh Vafaee, Daniel J. Fazakerley, Sean J. Humphrey, David E. James, Zdenka Kuncic

【 授权许可】

CC BY   
© The Author(s). 2016