Effect of ensiled mulberry leaves and sun-dried mulberry fruit pomace on the fecal bacterial community composition in finishing steers

BMC Microbiology

Research Article

Qingxiang Meng¹  Bo Zhou¹  Yan Li¹  Zhenming Zhou¹ 

[1] State Key Laboratory of Animal Nutrition, 100193, Beijing, People’s Republic of China;College of Animal Science and Technology, China Agricultural University, 100193, Beijing, People’s Republic of China;

关键词: Fecal bacteria community composition;    Sequencing;    Ensiled mulberry leaves (EML);    Sun-dried mulberry fruit pomace (SMFP);   

DOI  :  10.1186/s12866-017-1011-9

 received in 2016-10-30, accepted in 2017-04-17,  发布年份 2017

来源: Springer

【 摘 要 】

BackgroundHere, we aimed to investigate the effects of ensiled mulberry leaves (EML) and sun-dried mulberry fruit pomace (SMFP) on fecal bacterial communities in Simmental crossbred finishing steers. To this end, the steers were reared on a standard TMR diet, standard diet containing EML, and standard diet containing SMFP. The protein and energy levels of all the diets were similar. Illumina MiSeq sequencing of the V4 region of the 16S rRNA gene and quantitative real-time PCR were used to analyze and detect the fecal bacterial community.ResultsMost of the sequences were assigned to Firmicutes (56.67%) and Bacteroidetes (35.90%), followed by Proteobacteria (1.87%), Verrucomicrobia (1.80%) and Tenericutes (1.37%). The predominant genera were 5-7 N15 (5.91%), CF231 (2.49%), Oscillospira (2.33%), Paludibacter (1.23%) and Akkermansia (1.11%). No significant differences were observed in the numbers of Firmicutes (p = 0.28), Bacteroidetes (p = 0.63), Proteobacteria (p = 0.46), Verrucomicrobia (p = 0.17), and Tenericutes (p = 0.75) populations between the treatment groups. At the genus level, genera classified with high abundance (more than 0.1%) belonged primarily to Bacteroidetes and Firmicutes. Furthermore, no differences were observed at the genus level: 5-7 N15, CF231, Oscillospira, Paludibacter, and Akkermansia (p > 0.05 in all cases), except that rc4–4 was lower in the CON and SMFP groups than in the EML group (p = 0.02). There were no significant differences in the richness estimate and diversity indices between the groups (p > 0.16), and the different diets did not significantly influence most selected fecal bacterial species (p > 0.06), except for Ruminococcus albus, which was higher in the EML group (p < 0.01) and Streptococcus bovis, which was lower in the CON group (p < 0.01) relative to the other groups.ConclusionsIn conclusion, diets supplemented with EML and SMFP have little influence on the fecal bacterial community composition in finishing steers.

【 授权许可】

CC BY   
© The Author(s). 2017