Spectral classification of short numerical exon and intron sequences

BMC Bioinformatics

Poster Presentation

Hon Keung Kwan¹  Benjamin YM Kwan²  Jennifer YY Kwan³ 

[1] Department of Electrical & Computer Engineering, University of Windsor, N9B 3P4, Windsor, Ontario, Canada;Faculty of Medicine, University of Ottawa, K1H 8MS, Ottawa, Ontario, Canada;School of Medicine, Queen’s University, K7L 3N6, Kingston, Ontario, Canada;

关键词: Atomic Number;    Codon Usage;    Sequence Length;    Genome Annotation;    Intron Sequence;   

DOI  :  10.1186/1471-2105-12-S11-A13

来源: Springer

【 摘 要 】

This research presents three new numerical representations for classifying short exon and intron sequences using discrete Fourier transform period-3 value. Based on the human genome, results indicate that the Complex Twin-Pair representation is attractive compared with other numerical representations and the approach has potential applications in genome annotation and read mapping.

【 授权许可】

CC BY   
© Kwan et al; licensee BioMed Central Ltd. 2011