Rice bioinformatics in the genomic era: Status and perspectives

Crop Journal

Sangting Lao¹  Longjiang Fan¹  Lingjuan Xie²  Lei Jia³  Qian-Hao Zhu⁴ 

[1] Institute of Bioinformatics, Zhejiang University, Hangzhou 310058, Zhejiang, China;;Institute of Crop Science &Hainan Institute of Zhejiang University, Yonyou Industrial Park, Sanya 572025, Hainan, China;;Institute of Crop Science &

关键词: Rice;    Bioinformatics;    Genomic data;    Database;    Tool;   

DOI  :  

来源: DOAJ

【 摘 要 】

Rice is one of cereal crops and a model species for monocots. Since the release of the first draft rice genome sequences in 2002, considerable progress has been achieved in rice genomic researches, thanks to rapid development and efficient utilization of bioinformatics methods and tools. In this review, we summarize the progress of studies of rice genome sequencing and other omics and introduce the well-maintained bioinformatics databases and tools developed for rice genome resources and breeding. After reviewing the history of rice bioinformatics, we use single-cell sequencing and machine learning as examples showing how bioinformatics integrates emerging technologies and how it continues to develop for future rice research.

【 授权许可】

Unknown