High-Throughput Sequencing Indicates Novel Varicosavirus, Emaravirus, and Deltapartitivirus Infections in Vitis coignetiae

Viruses

Tomoyuki Nabeshima¹  Junya Abe² 

[1] Department of Agriculture, Yamagata University, Tsuruoka 997-8555, Japan;Smart Agriculture Division, JFE Engineering Corporation, Yokohama 230-8611, Japan;

关键词: next-generation sequencing (NGS);    virome;    RNA virus;    grape;   

DOI  :  10.3390/v13050827

来源: DOAJ

【 摘 要 】

Vitis coignetiae samples were collected from several locations in the northern area of Japan, and virome analysis using a high-throughput sequencing technique was performed. The data indicated that some of the collected samples were in mixed infections by various RNA viruses. Among these viruses, three were identified as newly recognized species with support of sequence identity and phylogenetic analysis. The viruses have been provisionally named the Vitis varicosavirus, Vitis emaravirus, and Vitis crypticvirus, and were assigned to the genus Varicosavirus, Emaravirus, and Deltapartitivirus, respectively.

【 授权许可】

Unknown