Robust Preimplantation Genetic Testing Strategy for Myotonic Dystrophy Type 1 by Bidirectional Triplet-Primed Polymerase Chain Reaction Combined With Multi-microsatellite Haplotyping Following Whole-Genome Amplification

Frontiers in Genetics

Samuel S. Chong³  Mulias Lian⁴  Caroline G. Lee⁶ 

[1] Cancer and Stem Cell Biology Program, Duke-NUS Graduate Medical School, Singapore, Singapore;Department of Biochemistry, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore;Department of Laboratory Medicine, National University Hospital, National University Health System, Singapore, Singapore;Department of Pediatrics, Khoo Teck Puat – National University Children’s Medical Institute, National University Health System, Singapore, Singapore;Department of Pediatrics, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore;Division of Medical Sciences, National Cancer Center, Singapore, Singapore;

关键词: preimplantation genetic testing;    DMPK;    myotonic dystrophy type 1;    triplet-primed polymerase chain reaction;    haplotype analysis;   

DOI  :  10.3389/fgene.2019.00589

来源: DOAJ

【 摘 要 】

Myotonic dystrophy type 1 (DM1) is caused by expansion of the DMPK CTG trinucleotide repeat. Disease transmission to offspring can be avoided through prenatal diagnosis or preimplantation genetic testing for monogenic disorders (PGT-M). We describe a robust strategy for DM1 PGT-M that can be applied to virtually any at-risk couple. This strategy utilizes whole-genome amplification, followed by triplet-primed PCR (TP-PCR) detection of expanded DMPK alleles, in parallel with single-tube haplotype analysis of 12 closely linked and highly polymorphic microsatellite markers. Bidirectional TP-PCR and dodecaplex marker PCR assays were optimized and validated on whole-genome amplified single lymphoblasts isolated from DM1 reference cell lines, and tested on a simulated PGT-M case comprising a parent-offspring trio and three simulated embryos. Bidirectional DMPK TP-PCR reliably detects repeat expansions even in the presence of non-CTG interruptions at either end of the expanded allele. Misdiagnoses, diagnostic ambiguity, and couple-specific assay customization are further minimized by the use of multi-marker haplotyping, preventing the loss of potentially unaffected embryos for transfer.

【 授权许可】

Unknown