Microbiomics and cloud-based analytics advance sustainable soil management

Frontiers in Bioscience-Landmark

Talambedu Usha¹  Arvind Kumar Goyal²  Hemavathy Ekambaram³  Sushil Kumar Middha³  Nijalingappa Ramesh⁴  Anupam J. Das⁴  Budiyal Ramesh Shilpa⁴  Renuka Ravinath⁴  Mothukapalli Krishnareddy Prasannakumar⁵  Bilgi Sampgod Rohith⁶ 

[1] Department of Biochemistry, Maharani Lakshmi Ammani College for Women, Bengaluru-560012, Karnataka, India;Department of Biotechnology, Bodoland University, Kokrajhar- 783370, Assam, India;Department of Biotechnology, Maharani Lakshmi Ammani College for Women, Bengaluru-560012, Karnataka, India;Department of Biotechnology, School of Applied Sciences, REVA University, Rukmini Knowledge Park, Bangalore-560064, Karnataka, India;Department of Plant Pathology, University of Agricultural Sciences, Bengaluru- 560065, India;Molsys Scientific (Molsys Pvt. Ltd) Yelahanka, Bangalore, Karnataka, India;

关键词: : microbiomics;    soil;    metagenomics;    dna;    sequencing;    review;   

DOI  :  10.2741/4903

来源: DOAJ

【 摘 要 】

Soil constitutes a major component of the agro-ecosystem. Unrestrained uses of chemical pesticides and increased human activities have contributed to unprecedented changes in soil microflora affecting productivity. Modern microbiomics has proven to be an indispensable tool to understand the adaptations underlying complex soil microbial communities and their beneficial applications. In this review, we seek to emphasize the scope of microbiomics in enhancing soil productivity by providing an overview of the various sequencing platforms considering key parameters such as the accuracy, read lengths, reads per run, time involved and weighing out their pros and cons. The advances in modern ultra-high-throughput microbiomics platforms in combination with cloud-based analytics for in-depth exploration of soil-microbe associations can help achieve sustainable soil management contributing to better plant yield and productivity.

【 授权许可】

Unknown