Plastome of Saraca asoca (Detarioideae, Fabaceae): Annotation, comparison among subfamily and molecular typing

Saudi Journal of Biological Sciences

卷:28

Fahad Al-Hemaid¹  Tapan Kumar Pan¹  Mohammad Abul Farah²  Meena Elangbam³  Mohammad Ajmal Ali³  Soo-Yong Kim⁴  M. Oliur Rahman⁵  Shankar Kumar Pandey⁶  Joongku Lee⁷  Khalid Mashay Alanazi⁷  Arun Bahadur Gurung⁸ 

[1] Corresponding authors.;

[2] Department of Basic Sciences and Social Sciences, North-Eastern Hill University, Shillong 793022, Meghalaya, India;

[3] Department of Botany and Microbiology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia;

[4] Department of Botany, TNB College, Tilka Manjhi Bhagalpur University, Bhagalpur 812007, Bihar, India;

[5] Department of Environment and Forest Resources, Chungnam National University, Daejeon 34134, Republic of Korea;

[6] Genetics Laboratory, Centre of Advanced Studies in Life Sciences, Manipur University, Canchipur 795 003, India;

[7] Genetics Laboratory, Department of Zoology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia;

[8] University Department of Botany, Tilka Manjhi Bhagalpur University, Bhagalpur 812007, Bihar, India;

关键词: Plastome;    Saraca asoca;    Detarioideae;    Fabaceae;    Molecular authentication;    Simple sequence repeat;   

DOI  :  

来源: DOAJ

【 摘 要 】

Saraca asoca (Roxb.) Willd. (subfamily Detarioideae, family Fabaceae) is a perennial evergreen sacred medicinal tree classified under ‘vulnerable’ by the IUCN. The chloroplast (cp) genome/plastome which follows uniparental inheritance contains many useful genetic information because of its conservative rate of evolution. The assembled cp genome of S. asoca which maps as a conserved circular structure revealed extensive rearrangement in gene organization, comprising total length 160,003 bp including LSC, SSC, IRa, and IRb, and GC content was 35.26%. Herein a set of rbcL and matK gene were established using molecular phylogenetic analyses for molecular typing of S. asoca.

【 授权许可】

Unknown