Mumame: a software tool for quantifying gene-specific point-mutations in shotgun metagenomic data

Metabarcoding and Metagenomics

Viktor Jonsson¹  Shruthi Magesh²  Johan Bengtsson-Palme³ 

[1] Chalmers Computational Systems Biology Infrastructure, Chalmers University of Technology, SE-412 96, Gothenburg, Sweden;Wisconsin Institute for Discovery, University of Wisconsin-Madison, 330 North Orchard Street, Madison WI 53715, USA;Department of Biotechnology, School of Bioengineering, SRM Institute of Science and Technology, Kattankulathur 603203, Tamil Nadu, India;Wisconsin Institute for Discovery, University of Wisconsin-Madison, 330 North Orchard Street, Madison WI 53715, USA;Department of Infectious Diseases, Institute of Biomedicine, The Sahlgrenska Academy, University of Gothenburg, Guldhedsgatan 10, SE-413 46, Gothenburg, Sweden;Centre for Antibiotic Resistance research (CARe) at University of Gothenburg, Gothenburg, Sweden;

关键词: Antibiotic resistance;    bioinformatic tools;    metagenomics;    mutation frequencies;    mutation detection;    statistical methods;   

DOI  :  10.3897/mbmg.3.36236

来源: Pensoft Publishers

【 授权许可】

CC BY