The Dark mAtteR iNvestigator (DARN) tool: getting to know the known unknowns in COI amplicon data

Metabarcoding and Metagenomics

Jens Carlsson¹  Laura Gargan¹  Sanni Hintikka¹  Haris Zafeiropoulos²  Christina Pavloudi³ 

[1]Area52 Research Group, School of Biology and Environmental Science/Earth Institute, University College Dublin, Dublin 4, Ireland, University College Dublin, Dublin, Ireland

[2]Department of Biology, University of Crete, Voutes University Campus, Heraklion, Greece, Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Heraklion, Greece

[3]Hellenic Centre for Marine Research (HCMR), Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Heraklion, Greece, University of Crete, Heraklion, Greece

[4]Hellenic Centre for Marine Research (HCMR), Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Heraklion, Greece, University of Crete, Heraklion, Greece

关键词: Docker;    environmental DNA (eDNA);    metabarcoding;    mitochondrial cytochrome C oxidase subunit I;    software tool;    tree of life (tol);    unassigned sequences;   

DOI  :  10.3897/mbmg.5.69657

来源: Pensoft Publishers

【 授权许可】

CC BY