Characterization of the complete chloroplast genome of Prunus clarofolia C.K. Schneid (Rosaceae)

Mitochondrial DNA Part B

Xian-Gui Yi¹  Yan-Feng Song¹  Qi Ye¹  Xian-Rong Wang¹  Meng Li¹ 

[1] Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Nanjing Forestry University, Jiangsu, Nanjing, Chin;

关键词: Chloroplast genome;    Prunus;    Cerasus;   

DOI  :  10.1080/23802359.2021.1975513

来源: Taylor & Francis

【 摘 要 】

Prunus clarofolia is an endemic species that widely distributed in subtropical regions of China. Here we present its complete plastome. The plastome of P. clarofolia is successfully assembled from raw reads sequenced by Illumina Hiseq 2500 platform system. The complete chloroplast of this species is 158,053 bp in length with 36.7% overall GC content, including a pair of invert repeat regions (IR) (26,393bp) that is divided by a large single copy region (LSC) (86,088bp) and a small single copy region (SSC) (19,179bp). The plastid genome contained a total of 130 genes, including 85 coding genes, 8 rRNA genes, and 37 tRNA genes. Each of rps16, atpF, rpoC1, clpP, petB, petD, rpl16, rpl2, ndhB, and ndhA contains one intron, rps12 and ycf3 contains two introns. Phylogenetic analysis indicates that P. clarofolia has a closer relationship with P. avium.

【 授权许可】

CC BY