The complete chloroplast genome of Castanopsis sieboldii (Makino) Hatus (Fagaceae)

Mitochondrial DNA Part B

Hyun Tak Shin¹  Hyunmi Kang²  Seokgon Park³  Hong Xi⁴  Jongsun Park⁴  Janghyuk Son⁴ 

[1] DMZ Botanic Garden, Korea National Arboretum, Yanggu, South Kore;Department of Landscape Architecture, Mokpo National University, Muan, Republic of Kore;Division of Forest Resources and Landscape Architecture, Sunchon National University, Sunchoen, Republic of Kore;InfoBoss Inc, Seoul, Republic of Kore;InfoBoss Research Center, Seoul, Republic of Kore;

关键词: Chloroplast genome;    Castanopsis sieboldii;    interspecific variation;    phylogenetic analysis;    Fagaceae;   

DOI  :  10.1080/23802359.2021.1966339

来源: Taylor & Francis

【 摘 要 】

Castanopsis sieboldii (Makino) Hatus is an evergreen tree that distributes in Eastern Asia including Islands of Korea and Japan. The chloroplast genome of C. sieboldii was successfully sequenced. Its length is 160,705 bp long (GC ratio is 36.8%) and has four subregions: 90,821 bp of large single copy (34.6%) and 19,014 bp of small single copy (30.8%) regions are separated by 25,075 bp of inverted repeat (42.8%) regions including 134 genes (89 protein-coding genes, eight rRNAs, and 37 tRNAs). Interspecific variations of Castanopsis are at a moderate level in comparison to those of the other genera. Phylogenetic trees show that C. sieboldii chloroplast genome was clustered with the other two Castanopsis species.

【 授权许可】

CC BY