Animal-borne acoustic data alone can provide high accuracy classification of activity budgets

Animal Biotelemetry

Isabelle Charrier¹  Chloé Huetz¹  Thierry Aubin¹  Andréa Thiebault²  Pierre Pistorius³ 

[1] CNRS, Institut des Neurosciences Paris-Saclay, Université Paris-Saclay, Orsay, France;Department of Zoology, Marine Apex Predator Research Unit, Institute for Coastal and Marine Research, Nelson Mandela University, Port Elizabeth, South Africa;Department of Zoology, Marine Apex Predator Research Unit, Institute for Coastal and Marine Research, Nelson Mandela University, Port Elizabeth, South Africa;DST/NRF Centre of Excellence at the Percy FitzPatrick Institute, Department of Zoology, Nelson Mandela University, Port Elizabeth, South Africa;

关键词: Bioacoustics;    Biologging;    Behaviour;    Machine learning;    Seabird;    Supervised learning;    Systematic review;   

DOI  :  10.1186/s40317-021-00251-1

来源: Springer

【 摘 要 】

BackgroundStudies on animal behaviour often involve the quantification of the occurrence and duration of various activities. When direct observations are challenging (e.g., at night, in a burrow, at sea), animal-borne devices can be used to remotely record the movement and behaviour of an animal (e.g., changing body posture and movement, geographical position) and/or its immediate surrounding environment (e.g., wet or dry, pressure, temperature, light). Changes in these recorded variables are related to different activities undertaken by the animal. Here we explored the use of animal-borne acoustic recorders to automatically infer activities in seabirds.ResultsWe deployed acoustic recorders on Cape gannets and analysed sound data from 10 foraging trips. The different activities (flying, floating on water and diving) were associated with clearly distinguishable acoustic features. We developed a method to automatically identify the activities of equipped individuals, exclusively from animal-borne acoustic data. A random subset of four foraging trips was manually labelled and used to train a classification algorithm (k-nearest neighbour model). The algorithm correctly classified activities with a global accuracy of 98.46%. The model was then used to automatically assess the activity budgets on the remaining non-labelled data, as an illustrative example. In addition, we conducted a systematic review of studies that have previously used data from animal-borne devices to automatically classify animal behaviour (n = 61 classifications from 54 articles). The majority of studies (82%) used accelerometers (alone or in combination with other sensors, such as gyroscopes or magnetometers) for classifying activities, and to a lesser extent GPS, acoustic recorders or pressure sensors, all potentially providing a good accuracy of classification (> 90%).ConclusionThis article demonstrates that acoustic data alone can be used to reconstruct activity budgets with very good accuracy. In addition to the animal’s activity, acoustic devices record the environment of equipped animals (biophony, geophony, anthropophony) that can be essential to contextualise the behaviour of animals. They hence provide a valuable alternative to the set of tools available to assess animals’ behaviours and activities in the wild.

【 授权许可】

CC BY