A SNP of HD-ZIP I transcription factor leads to distortion of trichome morphology in cucumber (Cucumis sativus L.)

BMC Plant Biology

Junsong Pan¹  Yue Chen¹  Duo Lv¹  Haifan Wen¹  Hui Du¹  Leyu Zhang¹  Huanle He¹  Gang Wang¹  Keyan Zhang¹  Jian Pan¹  Run Cai² 

[1] School of Agriculture and Biology, Shanghai Jiao Tong University, 200240, Shanghai, China;School of Agriculture and Biology, Shanghai Jiao Tong University, 200240, Shanghai, China;State Key Laboratory of Vegetable Germplasm Innovation, 300384, Tianjin, China;

关键词: Cucumber;    Trichome;    Map-based cloning;    Transcriptome;   

DOI  :  10.1186/s12870-021-02955-1

来源: Springer

【 摘 要 】

BackgroundTrichomes are excellent model systems for the analysis of cell differentiation and play essential roles in plant protection. From cucumber inbred line ‘WD1’, we identified an EMS-induced trichome abnormally developing mutant, nps, which exhibited smaller, denser and no pyramid-shaped head trichomes.ResultsUsing F2 and BC1 populations constructed from a cross between nps and ‘9930’, the genetic analysis showed that the nps trait is controlled by a single recessive nuclear gene. We identified CsNps by map-based cloning with 576 individuals of the F2 population generated from the cross of nps and inbred line ‘9930’. The CsNps was located at a 13.4-kb genomic region on chromosome 3, which region contains three predicted genes. Sequence analysis showed that only one single nucleotide mutation (C → T) between 9930 and nps was found in the second exon of Csa3G748220, a plant-specific class I HD-Zip gene. The result of allelism test also indicated that nps is a novel allelic mutant of Mict (Micro-trichome). Thus, nps was renamed mict-L130F. By comparing the transcriptome of mict-L130F vs WD1 and 06–2 (mict) vs 06–1 (wildtype, near-isogenic line of 06–2), several potential target genes that may be related to trichome development were identified.ConclusionsOur results demonstrate that Mict-L130F is involved in the morphogenesis of trichomes. Map-based cloning of the Mict-L130F gene could promote the study of trichome development in cucumber.

【 授权许可】

CC BY