DNA marker mining of ILSTS035 microsatellite locus on chromosome 6 of Hanwoo cattle

Journal of genetics

Jea-Young Lee3²  Jung-Sou Yeo¹  Jae-Woo Kim³ 

[1] Department of Animal Science, Yeungnam University, Gyeongsan, Gyeongbuk 712-749, Korea$$;Department of Statistics, Yeungnam University, Gyeongsan, Gyeongbuk 712-749, Korea$$;Institute of Biotechnology, Yeungnam University, Gyeongsan, Gyeongbuk 712-749, Korea$$

关键词: LOD score;    QTL;    permutation test;    𝐾-means clustering;    bootstrap method.;   

DOI  :  

学科分类：生物科学（综合）

来源: Indian Academy of Sciences

【 摘 要 】

We describe tests for detecting and locating quantitative trait loci (QTL) for traits in Hanwoo cattle. From results of a permutation test to detect QTL for marbling, we selected the microsatellite locus ILSTS035 on chromosome 6 for further analysis. 𝐾-means clustering analysis applied to five traits and nine DNA markers in ILSTS035 resulted in three cluster groups. Finally we employed the bootstrap test method to calculate confidence intervals using the resampling method to find major DNA markers. We conclude that the major markers of ILSTS035 locus on chromosome 6 of Hanwoo cattle are markers 235 bp and 266 bp.

【 授权许可】

Unknown