SBEToolbox: A Matlab Toolbox for Biological Network Analysis

Evolutionary Bioinformatics

Kranti Konganti¹ 

关键词: Matlab toolbox;    biological network;    node centrality;    network evolution;   

DOI  :  10.4137/EBO.S12012

学科分类：生物技术

来源: Sage Journals

【 摘 要 】

We present SBEToolbox (Systems Biology and Evolution Toolbox), an open-source Matlab toolbox for biological network analysis. It takes a network file as input, calculates a variety of centralities and topological metrics, clusters nodes into modules, and displays the network using different graph layout algorithms. Straightforward implementation and the inclusion of high-level functions allow the functionality to be easily extended or tailored through developing custom plugins. SBEGUI, a menu-driven graphical user interface (GUI) of SBEToolbox, enables easy access to various network and graph algorithms for programmers and non-programmers alike. All source code and sample data are freely available at https://github.com/biocoder/SBEToolbox/releases.

【 授权许可】

Unknown