期刊论文详细信息
Plant Methods
FACS-based purification of Arabidopsis microspores, sperm cells and vegetative nuclei
Jörg D Becker1  Robert A Martienssen2  R Keith Slotkin3  Leonor C Boavida1  Joseph P Calarco2  Telma Lopes1  Rui Gardner1  Filipe Borges1 
[1] Instituto Gulbenkian de Ciência, Rua da Quinta Grande 6, 2780-156, Oeiras, Portugal;Cold Spring Harbor Laboratory, 1 Bungtown Road, 11724, Cold Spring Harbor, NY, USA;Department of Molecular Genetics, The Ohio State University, 43210, Columbus, OH, USA
关键词: Fluorescence-activated cell sorting;    Arabidopsis;    Plant germline;    Vegetative nucleus;    Sperm cell;    Microspore;    Pollen;   
Others  :  821399
DOI  :  10.1186/1746-4811-8-44
 received in 2012-05-31, accepted in 2012-10-08,  发布年份 2012
PDF
【 摘 要 】

Background

The male germline in flowering plants differentiates by asymmetric division of haploid uninucleated microspores, giving rise to a vegetative cell enclosing a smaller generative cell, which eventually undergoes a second mitosis to originate two sperm cells. The vegetative cell and the sperm cells activate distinct genetic and epigenetic mechanisms to control pollen tube growth and germ cell specification, respectively. Therefore, a comprehensive characterization of these processes relies on efficient methods to isolate each of the different cell types throughout male gametogenesis.

Results

We developed stable transgenic Arabidopsis lines and reliable purification tools based on Fluorescence-Activated Cell Sorting (FACS) in order to isolate highly pure and viable fractions of each cell/nuclei type before and after pollen mitosis. In the case of mature pollen, this was accomplished by expressing GFP and RFP in the sperm and vegetative nuclei, respectively, resulting in 99% pure sorted populations. Microspores were also purified by FACS taking advantage of their characteristic small size and autofluorescent properties, and were confirmed to be 98% pure.

Conclusions

We provide simple and efficient FACS-based purification protocols for Arabidopsis microspores, vegetative nuclei and sperm cells. This paves the way for subsequent molecular analysis such as transcriptomics, DNA methylation analysis and chromatin immunoprecipitation, in the developmental context of microgametogenesis in Arabidopsis.

【 授权许可】

   
2012 Borges et al.; licensee BioMed Central Ltd.

【 预 览 】
附件列表
Files Size Format View
20140712073748302.pdf 3656KB PDF download
Figure 4. 106KB Image download
Figure 3. 82KB Image download
Figure 2. 67KB Image download
Figure 1. 83KB Image download
【 图 表 】

Figure 1.

Figure 2.

Figure 3.

Figure 4.

【 参考文献 】
  • [1]Boavida LC, Becker JD, Feijo JA: The making of gametes in higher plants. Int J Dev Biol 2005, 49(5–6):595-614.
  • [2]Borges F, Gomes G, Gardner R, Moreno N, McCormick S, Feijo JA, Becker JD: Comparative transcriptomics of Arabidopsis sperm cells. Plant Physiol 2008, 148(2):1168-1181.
  • [3]Borges F, Pereira PA, Slotkin RK, Martienssen RA, Becker JD: MicroRNA activity in the Arabidopsis male germline. J Exp Bot 2011, 62(5):1611-1620.
  • [4]Xu H, Swoboda I, Bhalla PL, Sijbers AM, Zhao C, Ong EK, Hoeijmakers JH, Singh MB: Plant homologue of human excision repair gene ERCC1 points to conservation of DNA repair mechanisms. Plant J 1998, 13(6):823-829.
  • [5]Okada T, Bhalla PL, Singh MB: Expressed sequence tag analysis of Lilium longiflorum generative cells. Plant Cell Physiol 2006, 47(6):698-705.
  • [6]Gou XP, Xu Y, Tang L, Yan F, Chen F: Representative cDNA library from isolated rice sperm cells. Acta Bot Sin 2001, 43(10):1093-1096.
  • [7]Russell SD, Gou X, Wong CE, Wang X, Yuan T, Wei X, Bhalla PL, Singh MB: Genomic profiling of rice sperm cell transcripts reveals conserved and distinct elements in the flowering plant male germ lineage. New Phytol 2012, 195(3):560-573.
  • [8]Engel ML, Chaboud A, Dumas C, McCormick S: Sperm cells of Zea mays have a complex complement of mRNAs. Plant J 2003, 34(5):697-707.
  • [9]Xin HP, Peng XB, Ning J, Yan TT, Ma LG, Sun MX: Expressed sequence-tag analysis of tobacco sperm cells reveals a unique transcriptional profile and selective persistence of paternal transcripts after fertilization. Sex Plant Reprod 2011, 24(1):37-46.
  • [10]Gou X, Yuan T, Wei X, Russell SD: Gene expression in the dimorphic sperm cells of Plumbago zeylanica: transcript profiling, diversity, and relationship to cell type. Plant J 2009, 60(1):33-47.
  • [11]Schoft VK, Chumak N, Mosiolek M, Slusarz L, Komnenovic V, Brownfield L, Twell D, Kakutani T, Tamaru H: Induction of RNA-directed DNA methylation upon decondensation of constitutive heterochromatin. EMBO Rep 2009, 10(9):1015-1021.
  • [12]Berger F, Twell D: Germline specification and function in plants. Annu Rev Plant Biol 2011, 62:461-484.
  • [13]Slotkin RK, Vaughn M, Borges F, Tanurdzic M, Becker JD, Feijo JA, Martienssen RA: Epigenetic reprogramming and small RNA silencing of transposable elements in pollen. Cell 2009, 136(3):461-472.
  • [14]Becker JD, Boavida LC, Carneiro J, Haury M, Feijo JA: Transcriptional profiling of Arabidopsis tissues reveals the unique characteristics of the pollen transcriptome. Plant Physiol 2003, 133(2):713-725.
  • [15]Wojcik K, Dobrucki JW: Interaction of a DNA intercalator DRAQ5, and a minor groove binder SYTO17, with chromatin in live cells–influence on chromatin organization and histone-DNA interactions. Cytometry A 2008, 73(6):555-562.
  • [16]Mari PO, Verbiest V, Sabbioneda S, Gourdin AM, Wijgers N, Dinant C, Lehmann AR, Vermeulen W, Giglia-Mari G: Influence of the live cell DNA marker DRAQ5 on chromatin-associated processes. DNA Repair (Amst) 2010, 9(7):848-855.
  • [17]Rotman N, Durbarry A, Wardle A, Yang WC, Chaboud A, Faure JE, Berger F, Twell D: A novel class of MYB factors controls sperm-cell formation in plants. Curr Biol 2005, 15(3):244-248.
  • [18]Okada T, Endo M, Singh MB, Bhalla PL: Analysis of the histone H3 gene family in Arabidopsis and identification of the male-gamete-specific variant AtMGH3. Plant J 2005, 44(4):557-568.
  • [19]Ingouff M, Hamamura Y, Gourgues M, Higashiyama T, Berger F: Distinct dynamics of HISTONE3 variants between the two fertilization products in plants. Curr Biol 2007, 17(12):1032-1037.
  • [20]Galbraith DW, Harkins KR, Maddox JM, Ayres NM, Sharma DP, Firoozabady E: Rapid flow cytometric analysis of the cell cycle in intact plant tissues. Science 1983, 220(4601):1049-1051.
  • [21]Honys D, Twell D: Transcriptome analysis of haploid male gametophyte development in Arabidopsis. Genome Biol 2004, 5(11):R85. BioMed Central Full Text
  • [22]Pechan PM, Keller WA, Mandy F, Bergeron M: Selection of Brassica napus L. embryogenic microspores by flow sorting. Plant Cell Rep 1988, 7(6):396-398.
  • [23]Schoft VK, Chumak N, Choi Y, Hannon M, Garcia-Aguilar M, Machlicova A, Slusarz L, Mosiolek M, Park JS, Park GT, et al.: Function of the DEMETER DNA glycosylase in the Arabidopsis thaliana male gametophyte. Proc Natl Acad Sci USA 2011, 108(19):8042-8047.
  • [24]Calarco JP, Martienssen RA: Genome reprogramming and small interfering RNA in the Arabidopsis germline. Curr Opin Genet Dev 2011, 21(2):134-139.
  • [25]Curtis MD, Grossniklaus U: A gateway cloning vector set for high-throughput functional analysis of genes in planta. Plant Physiol 2003, 133(2):462-469.
  文献评价指标  
  下载次数:85次 浏览次数:30次