Particle and Fibre Toxicology | |
Molecular characterization of flaviviruses from field-collected mosquitoes in northwestern Italy, 2011–2012 | |
Maria Lucia Mandola1  Simone Peletto1  Pierluigi Acutis1  Cristina Casalone1  Alessandra Pautasso1  Marino Prearo1  Rosanna Desiato1  Maria Cristina Radaelli1  Nicoletta Vitale1  Andrea Mosca2  Marco Ballardini3  Francesco Cerutti1  Francesca Rizzo1  | |
[1] Istituto Zooprofilattico Sperimentale del Piemonte, Liguria e Valle d’Aosta, Via Bologna 148, I-10154 Torino, Italy;Istituto per le Piante da Legno e l’Ambiente – IPLA, Corso Casale 476, I- 10132 Torino, Italy;Sezione di Imperia, Istituto Zooprofilattico Sperimentale del Piemonte, Liguria e Valle d’Aosta, Via Nizza 4, I-18100 Imperia, Italy | |
关键词: Usutu virus; Mosquito surveillance; Marisma mosquito virus; Insect-specific flavivirus; | |
Others : 1181841 DOI : 10.1186/1756-3305-7-395 |
|
received in 2014-03-08, accepted in 2014-08-20, 发布年份 2014 | |
【 摘 要 】
Background
The genus Flavivirus comprises several mosquito-borne species, including the zoonotic pathogens West Nile and Usutu virus, circulating in animals and humans in Italy since 1998. Due to its ecological and geographical features, Piedmont is considered a risk area for flavivirus transmission. Here we report the results of a flavivirus survey (detection and genetic characterization) of mosquitoes collected in Piedmont in 2012 and the genetic characterization of three strains detected in 2011.
Methods
Pools of 1–203 mosquitoes, upon RNA extraction with TRIzol, were screened by a PCR assay for a 263 bp fragment of the Flavivirus NS5 gene. All positive samples were tested with a specific PCR for the E protein gene of Usutu virus and a generic Flavivirus RT-nested-PCR for a larger tract of the NS5 gene before sequencing. Phylogenetic trees were built with both NS5 fragments of representative Flavivirus species. DNA extracts of part of the positive pools were tested to detect sequences integrated in the host genome.
Results
Thirty-four mosquito pools resulted positive for flaviviruses, and twenty-five flavivirus sequences underwent phylogenetic analysis for the short NS5 fragment. Among the 19 sequences correlating with the insect-specific flavivirus group, ten samples, retrieved from Aedes albopictus, clustered within Aedes flavivirus, while the other nine aggregated in a separate clade composed of strains from various mosquito species (mainly Aedes vexans) from Piedmont and the Czech Republic. Six out of these nine also presented a DNA form of the sequence. The remaining sequences belonged to the mosquito-borne group: four, all from Culex pipiens, correlated to Italian Usutu virus strains, whereas two, from Ochlerotatus caspius, were highly similar to Marisma mosquito virus (MMV).
Conclusions
Our findings confirm the circulation of Usutu virus and of the potentially zoonotic Marisma mosquito virus in Piedmont. This is the first detection of Aedes flavivirus in Piedmont. Finally, further evidence for the integration of Flavivirus nucleic acid into the host genome has been shown. These results underline the importance of continuing intense mosquito-based surveillance in Piedmont, supported by a mosquito control program in areas at high risk for human exposure.
【 授权许可】
2014 Rizzo et al.; licensee BioMed Central Ltd.
【 预 览 】
Files | Size | Format | View |
---|---|---|---|
20150515083149807.pdf | 2774KB | download | |
Figure 3. | 85KB | Image | download |
Figure 2. | 98KB | Image | download |
Figure 1. | 167KB | Image | download |
【 图 表 】
Figure 1.
Figure 2.
Figure 3.
【 参考文献 】
- [1]Huhtamo E, Putkuri N, Kurkela S, Manni T, Vaheri A, Vapalahti O, Uzcátegui NY: Characterization of a novel flavivirus from mosquitoes in northern europe that is related to mosquito-borne flaviviruses of the tropics. J Virol 2009, 83:9532-9540.
- [2]Gubler DJ: The global emergence/resurgence of arboviral diseases as public health problems. Arch Med Res 2002, 33:330-342.
- [3]Billoir F, de Chesse R, Tolou H, de Micco P, Gould EA, de Lamballerie X: Phylogeny of the genus Flavivirus using complete coding sequences of arthropod-borne viruses and viruses with no known vector. J Gen Virol 2000, 81:781-790.
- [4]Kuno G, Chang G-JJ, Tsuchiya KR, Karabatsos N, Cropp CB: Phylogeny of the genus Flavivirus. J Virol 1998, 72:73-83.
- [5]Cook S, Holmes EC: A multigene analysis of the phylogenetic relationships among the flaviviruses (Family: Flaviviridae) and the evolution of vector transmission. Arch Virol 2006, 151:309-325.
- [6]Calisher CH, Gould EA: Taxonomy of the virus family Flaviviridae. Adv Virus Res 2003, 59:1-19.
- [7]Cook S, Chung BY-W, Bass D, Moureau G, Tang S, McAlister E, Culverwell CL, Glücksman E, Wang H, Brown TDK, Gould EA, Harbach RE, de Lamballerie X, Firth AE: Novel virus discovery and genome reconstruction from field RNA samples reveals highly divergent viruses in dipteran hosts. PLoS One 2013, 8:e80720.
- [8]Stollar V, Thomas VL: An agent in the Aedes aegypti cell line (Peleg) which causes fusion of Aedes albopictus cells. Virology 1975, 64:367-377.
- [9]Sang RC, Gichogo A, Gachoya J, Dunster MD, Ofula V, Hunt a R, Crabtree MB, Miller BR, Dunster LM: Isolation of a new flavivirus related to cell fusing agent virus (CFAV) from field-collected flood-water Aedes mosquitoes sampled from a dambo in central Kenya. Arch Virol 2003, 148:1085-1093.
- [10]Crabtree MB, Sang RC, Stollar V, Dunster LM, Miller BR: Genetic and phenotypic characterization of the newly described insect flavivirus, Kamiti River virus. Arch Virol 2003, 148:1095-1118.
- [11]Hoshino K, Isawa H, Tsuda Y, Kazuhiko Y, Sasaki T, Yuda M, Takasaki T, Kobayashi M, Sawabe K: Genetic characterization of a new insect flavivirus isolated from Culex pipiens mosquito in Japan. Virology 2007, 359:405-414.
- [12]Hoshino K, Isawa H, Tsuda Y, Sawabe K, Kobayashi M: Isolation and characterization of a new insect flavivirus from Aedes albopictus and Aedes flavopictus mosquitoes in Japan. Virology 2009, 391:119-129.
- [13]Vázquez A, Sánchez-Seco M-P, Palacios G, Molero F, Reyes N, Ruiz S, Aranda C, Marqués E, Escosa R, Moreno J, Figuerola J, Tenorio A: Novel flaviviruses detected in different species of mosquitoes in Spain. Vector Borne Zoonotic Dis 2012, 12:223-229.
- [14]Roiz D, Vázquez A, Seco MPS, Tenorio A, Rizzoli A: Detection of novel insect flavivirus sequences integrated in Aedes albopictus (Diptera: Culicidae) in Northern Italy. Virol J 2009, 6:93.
- [15]Calzolari M, Bonilauri P, Bellini R, Caimi M, Defilippo F, Maioli G, Albieri A, Medici A, Veronesi R, Pilani R, Gelati A, Angelini P, Parco V, Fabbi M, Barbieri I, Lelli D, Lavazza A, Cordioli P, Dottori M: Arboviral Survey of Mosquitoes in Two Northern Italian Regions in 2007 and 2008. Vector Borne Zoonotic Dis 2010, 10:641-647.
- [16]Parreira R, Cook S, Lopes Â, de Matos AP, de Almeida APG, Piedade J, Esteves A: Genetic characterization of an insect-specific flavivirus isolated from Culex theileri mosquitoes collected in southern Portugal. Virus Res 2012, 167:152-161.
- [17]Aranda C, Sánchez-Seco MP, Cáceres F, Escosa R, Gálvez JC, Masià M, Marqués E, Ruíz S, Alba A, Busquets N, Vázquez A, Castellà J, Tenorio A: Detection and monitoring of mosquito flaviviruses in Spain between 2001 and 2005. Vector Borne Zoonotic Dis 2009, 9:171-178.
- [18]Sánchez-Seco M-P, Vázquez A, Collao X, Hernández L, Aranda C, Ruiz S, Escosa R, Marqués E, Bustillo M-A, Molero F, Tenorio A: Surveillance of Arboviruses in Spanish Wetlands: Detection of New Flavi- and Phleboviruses. Vector Borne Zoonotic Dis 2010, 10:203-206.
- [19]Crochu S, Cook S, Attoui H, Charrel RN, De Chesse R, Belhouchet M, Lemasson J-J, de Micco P, de Lamballerie X: Sequences of flavivirus-related RNA viruses persist in DNA form integrated in the genome of Aedes spp. mosquitoes. J Gen Virol 2004, 85:1971-1980.
- [20]Junglen S, Kopp A, Kurth A, Pauli G, Ellerbrok H, Leendertz FH: A new flavivirus and a new vector: characterization of a novel flavivirus isolated from uranotaenia mosquitoes from a tropical rain forest. J Virol 2009, 83:4462-4468.
- [21]Hubalek Z, Halouzka J: West Nile fever: a reemerging mosquito-borne viral disease in Europe. Emerg Infect Dis 1999, 5:643-650.
- [22]Weissenböck H, Kolodziejek J, Url A, Lussy H, Rebel-Bauder B, Nowotny N: Emergence of Usutu virus, an African mosquito-borne flavivirus of the Japanese encephalitis virus group, central Europe. Emerg Infect Dis 2002, 8:652-656.
- [23]Bakonyi T, Erdélyi K, Ursu K, Ferenczi E, Csörgo T, Lussy H, Chvala S, Bukovsky C, Meister T, Weissenböck H, Nowotny N: Emergence of Usutu virus in Hungary. J Clin Microbiol 2007, 45:3870-3874.
- [24]Barzon L, Squarzon L, Cattai M, Franchin E, Pagni S, Cusinato R, Palu G: West Nile virus infection in Veneto region, Italy, 2008–2009. Eurosurveillance 2009., 14
- [25]Becker N, Jöst H, Ziegler U, Eiden M, Höper D, Emmerich P, Fichet-Calvet E, Ehichioya DU, Czajka C, Gabriel M, Hoffmann B, Beer M, Tenner-Racz K, Racz P, Günther S, Wink M, Bosch S, Konrad A, Pfeffer M, Groschup MH, Schmidt-Chanasit J: Epizootic emergence of Usutu virus in wild and captive birds in Germany. PLoS One 2012, 7:e32604.
- [26]Autorino GL, Battisti A, Deubel V, Ferrari G, Forletta R, Giovannini A, Lelli R, Murri S, Scicluna MT: West Nile virus epidemic in horses, Tuscany region, Italy. Emerg Infect Dis 2002, 8:1372-1378.
- [27]Calistri P, Giovannini A, Savini G, Monaco F, Bonfanti L, Ceolin C, Terregino C, Tamba M, Cordioli P, Lelli R: West Nile virus transmission in 2008 in north-eastern Italy. Zoonoses Public Health 2010, 57:211-219.
- [28]Rizzo C, Salcuni P, Nicoletti L, Ciufolini MG, Russo F, Masala R, Frongia O, Finarelli a C, Gramegna M, Gallo L, Pompa MG, Rezza G, Salmaso S, Declich S: Epidemiological surveillance of West Nile neuroinvasive diseases in Italy, 2008 to 2011. Euro Surveill 2012, 17:1-7.
- [29]West Nile bulletin. http://www.epicentro.iss.it/problemi/westNile/bollettino.asp webcite
- [30]Bonilauri P, Bellini R, Calzolari M, Angelini R, Venturi L, Fallacara F, Cordioli P, Angelini P, Venturelli C, Merialdi G, Dottori M: Chikungunya virus in Aedes albopictus, Italy. Emerg Infect Dis 2008, 14:852-854.
- [31]Rezza G: Chikungunya and West Nile virus outbreaks: what is happening in north-eastern Italy? Eur J Public Health 2009, 19:236-237.
- [32]Cavrini F, Gaibani P, Longo G, Pierro A, Rossini G, Bonilauri P, Gerundi G, Di Benedetto F, Pasetto A, Girardis M, Dottori M, Landini MP, Sambri V: Usutu virus infection in a patient who underwent orthotropic liver transplantation, Italy, August-September 2009. Euro Surveill 2009., 14
- [33]Pecorari M, Longo G, Gennari W, Grottola A, Sabbatini A, Tagliazucchi S, Savini G, Monaco F, Simone M, Lelli R, Rumpianesi F: First human case of Usutu virus neuroinvasive infection, Italy, August-September 2009. Euro Surveill 2009, 14:5-6.
- [34]Weissenböck H, Bakonyi T, Rossi G, Mani P, Nowotny N: Usutu virus, Italy, 1996. Emerg Infect Dis 2013, 19:274-277.
- [35]Bisanzio D, Giacobini M, Bertolotti L, Mosca A, Balbo L, Kitron U, Vazquez-Prokopec GM: Spatio-temporal patterns of distribution of West Nile virus vectors in eastern Piedmont Region, Italy. Parasit Vectors 2011, 4:230.
- [36]Cerutti F, Giacobini M, Mosca A, Grasso I, Rambozzi L, Rossi L, Bertolotti L: Evidence of mosquito-transmitted flavivirus circulation in piedmont, north-western Italy. Parasit Vectors 2012, 5:99.
- [37]Ministero della Salute e Centro di Referenza Nazionale per lo studio delle Malattie Esotiche Istituto G. Caporale – Teramo (2 Marzo 2012): Piano Di Sorveglianza Della West Nile Disease (WND) Nelle Areeurbane. Relazione Attività. Gennaio-Dicembre 2011. http://www.salute.gov.it/imgs/C_17_pubblicazioni_1692_allegato.pdf webcite
- [38]Pautasso A, Desiato R, Bertolini S, Vitale N, Radaelli MC, Mancini M, Rizzo F, Mosca A, Calzolari M, Prearo M, Mandola ML, Maurella C, Mignone W, Chiavacci L, Casalone C: Mosquito surveillance in Northwestern Italy to monitor the occurrence of tropical vector-borne diseases. Transbound Emerg Dis 2013, 60:154-161.
- [39]Severini F, Toma L, Luca M d, Romi R: Identification of the adult stages of the Italian mosquitoes (Diptera, Culicidae). Fragm Entomol 2009, 41:213-372.
- [40]Stojanovich CJ, Scott HG: Mosquitoes of Italy: Mosquitoes of the Italian Biogeographic Area Which Includes the Republic of Malta, the French Island of Corsica and All of Italy except the Far-Northern Provinces. USA: Stojanovich CJ & Scott HG; 1997:200.
- [41]Scaramozzino N, Crance JM, Jouan A, DeBriel DA, Stoll F, Garin D: Comparison of flavivirus universal primer pairs and development of a rapid, highly sensitive heminested reverse transcription-PCR assay for detection of flaviviruses targeted to a conserved region of the NS5 gene sequences. J Clin Microbiol 2001, 39:1922-1927.
- [42]Tang Y, Anne Hapip C, Liu B, Fang CT: Highly sensitive TaqMan RT-PCR assay for detection and quantification of both lineages of West Nile virus RNA. J Clin Virol 2006, 36:177-182.
- [43]Manarolla G, Bakonyi T, Gallazzi D, Crosta L, Weissenböck H, Dorrestein G, Nowotny N: Usutu virus in wild birds in northern Italy. Vet Microbiol 2010, 141:159-163.
- [44]Biggerstaff B: PooledInfRate software. Vector Borne Zoonotic Dis 2005, 5:420-421.
- [45]Paradis E: APE: analyses of phylogenetics and evolution in R language. Bioinformatics 2004, 20:289-290.
- [46]R Development Core Team: R: A Language and Environment for Statistical Computing. Vienna, Austria: R Foundation for Statistical Computing; 2008.
- [47]Edgar RC: MUSCLE: Multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 2004, 32:1792-1797.
- [48]Gouy M, Guindon S, Gascuel O: SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building. Mol Biol Evol 2010, 27:221-224.
- [49]Sievers F, Wilm A, Dineen D, Gibson TJ, Karplus K, Li W, Lopez R, McWilliam H, Remmert M, Söding J, Thompson JD, Higgins DG: Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega. Mol Syst Biol 2011, 7:539.
- [50]Guindon S, Gascuel O: A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 2003, 52:696-704.
- [51]Darriba D, Taboada GL, Doallo R, Posada D: jModelTest 2: more models, new heuristics and parallel computing. Nat Methods 2012, 9:772.
- [52]Huelsenbeck JP, Ronquist F: MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 2001, 17:754-755.
- [53]Ronquist F, Huelsenbeck JP: MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2003, 19:1572.
- [54]Miller MA, Pfeiffer W, Schwartz T: Creating the CIPRES Science Gateway for Inference of Large Phylogenetic Trees. In Proceedings of the Gateway Computing Environments Workshop: 14 November 2010; New Orleans. Washington DC, USA: IEEE; 2010:1-8.
- [55]Ding S-W, Voinnet O: Antiviral immunity directed by small RNAs. Cell 2007, 130:413-426.
- [56]Campbell CL, Keene KM, Brackney DE, Olson KE, Blair CD, Wilusz J, Foy BD: Aedes aegypti uses RNA interference in defense against Sindbis virus infection. BMC Microbiol 2008, 8:47.
- [57]Reinert JE: New classification for the composite genus Aedes (Diptera: Culicidae: Aedini), elevation of subgenus Ochlerotatus to generic rank, reclassification of the other subgenera, and notes on certain subgenera and species. J Am Mosq Control Assoc 2000, 16:175-188.
- [58]Cook S, Moureau G, Kitchen A, Gould EA, de Lamballerie X, Holmes EC, Harbach RE: Molecular evolution of the insect-specific flaviviruses. J Gen Virol 2012, 93:223-234.
- [59]Steinmetz HW, Bakonyi T, Weissenböck H, Hatt J-M, Eulenberger U, Robert N, Hoop R, Nowotny N: Emergence and establishment of Usutu virus infection in wild and captive avian species in and around Zurich, Switzerland–genomic and pathologic comparison to other central European outbreaks. Vet Microbiol 2011, 148:207-212.
- [60]Savini G, Monaco F, Terregino C, Di Gennaro A, Bano L, Pinoni C, De Nardi R, Bonilauri P, Pecorari M, Di Gialleonardo L, Bonfanti L, Polci A, Calistri P, Lelli R: Usutu virus in ITALY: an emergence or a silent infection? Vet Microbiol 2011, 151:264-274.