Plant Methods | |
A device for single leaf labelling with CO2 isotopes to study carbon allocation and partitioning in Arabidopsis thaliana | |
Samuel C Zeeman1  Patrick Flütsch1  Antonia Müller1  Katharina Kölling1  | |
[1] Department of Biology, Institute of Agricultural Sciences, ETH Zurich, Universitätsstrasse 2, 8092 Zurich, Switzerland | |
关键词: Sink-source relationships; Isotope labelling; Phloem transport; Assimilate partitioning; Carbohydrate metabolism; Photosynthesis; Arabidopsis; | |
Others : 805658 DOI : 10.1186/1746-4811-9-45 |
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received in 2013-07-09, accepted in 2013-11-01, 发布年份 2013 | |
【 摘 要 】
Background
Plant biomass consists primarily of carbohydrates derived from photosynthesis. Monitoring the assimilation of carbon via the Calvin-Benson cycle and its subsequent utilisation is fundamental to understanding plant growth. The use of stable and radioactive carbon isotopes, supplied to plants as CO2, allows the measurement of fluxes through the intermediates of primary photosynthetic metabolism, long-distance transport of sugars in the vasculature, and the synthesis of structural and storage components.
Results
Here we describe the design of a system for supplying isotopically labelled CO2 to single leaves of Arabidopsis thaliana. We demonstrate that the system works well using short pulses of 14CO2 and that it can be used to produce robust qualitative and quantitative data about carbon export from source leaves to the sink tissues, such as the developing leaves and the roots. Time course experiments show the dynamics of carbon partitioning between storage as starch, local production of biomass, and export of carbon to sink tissues.
Conclusion
This isotope labelling method is relatively simple to establish and inexpensive to perform. Our use of 14CO2 helps establish the temporal and spatial allocation of assimilated carbon during plant growth, delivering data complementary to those obtained in recent studies using 13CO2 and MS-based metabolomics techniques. However, we emphasise that this labelling device could also be used effectively in combination with 13CO2 and MS-based techniques.
【 授权许可】
2013 Kölling et al.; licensee BioMed Central Ltd.
【 预 览 】
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【 参考文献 】
- [1]Moorby J, Evans NTS, Ebert M: Translocation of 11C-labelled photosynthate in soybean. J Exp Bot 1963, 14:210-220.
- [2]Minchin PEH, Thorpe MR, Farrar JF: A simple mechanistic model of phloem transport which explains sink priority. J Exp Bot 1993, 44:947-955.
- [3]Gould N, Thorpe MR, Pritchard J, Christeller JT, Williams LE, Roeb G, Schurr U, Minchin PEH: AtSUC2 has a role for sucrose retrieval along the phloem pathway: Evidence from carbon-11 tracer studies. Plant Sci 2012, 188:97-101.
- [4]Schwachtje J, Minchin PEH, Jahnke S, Van Dongen JT, Schittko U, Baldwin IT: SNF1-related kinases allow plants to tolerate herbivory by allocating carbon to roots. Proc Natl Acad Sci USA 2006, 103:12935-12940.
- [5]Babst BA, Karve AA, Judt T: Radio-metabolite analysis of carbon-11 biochemical partitioning to non-structural carbohydrates for integrated metabolism and transport studies. Plant Cell Physiol 2013, 54:1016-1025.
- [6]Krishnan P, Kruger NJ, Ratcliffe RG: Metabolite fingerprinting and profiling in plants using NMR. J Exp Bot 2005, 56:255-265.
- [7]Huege J, Sulpice R, Gibon Y, Lisec J, Koehl K, Kopka J: GC-EI-TOF-MS analysis of in vivo carbon-partitioning into soluble metabolite pools of higher plants by monitoring isotope dilution after 13CO2 labelling. Phytochemistry 2007, 68:2258-2272.
- [8]Cliquet JB, Deléens E, Bousser A, Martin M, Lescure JC, Prioul JL, Mariotti A, Morot-Gaudry JF: Estimation of carbon and nitrogen allocation during stalk elongation by C-13 and N-15 tracing in Zea mays L. Plant Physiol 1990, 92:79-87.
- [9]Améziane R, Deléens E, Noctor G, Morot-Gaudry JF, Limami MA: Stage of development is an important determinant in the effect of nitrate on photoassimilate (13C) partitioning in chicory (Cichorium intybus). J Exp Bot 1997, 48:25-33.
- [10]Dyckmans J, Flessa H, Shangguan Z, Beese F: A dual C-13 and N-15 long term labelling technique to investigate uptake and translocation of C and N in beech (Fagus sylvatica L.). Isotopes Environ Health Stud 2000, 36:63-78.
- [11]Calvin M: The photosynthetic carbon cycle. J Chem Soc 1956, 1895-1915.
- [12]Schaefer J, Kier LD, Stejskal EO: Characterization of photorespiration in intact leaves using 13carbon dioxide labeling. Plant Physiol 1980, 65:254-259.
- [13]Vernon LP, Aronoff S: Metabolism of soybean leaves. IV. Translocation from soybean leaves. Arch Biochem Biophys 1952, 36:383-398.
- [14]Aronoff S: Translocation from soybean leaves II. Plant Physiol 1955, 30:184-186.
- [15]Turgeon R, Webb JA: Leaf development and phloem transport in Cucurbita pepo: transition from import to export. Planta 1973, 113:179-191.
- [16]Fellows RJ, Geiger DR: Structural and physiological changes in sugar beet leaves during sink to source conversion. Plant Physiol 1974, 54:877-885.
- [17]Turgeon R: The sink-source transition in leaves. Annu Rev Plant Physiol Plant Mol Biol 1989, 40:119-138.
- [18]Jones H, Martin RV, Porter HK: Translocation of 14carbon in tobacco following assimilation of 14carbon dioxide by a single leaf. Ann Bot 1959, 23:493-508.
- [19]Joy KW: Translocation in sugar beet. I. Assimilation of 14CO2 and distribution of materials from leaves. J Exp Bot 1964, 15:485-494.
- [20]Schwender J, Goffman F, Ohlrogge JB, Shachar-Hill Y: Rubisco without the Calvin cycle improves the carbon efficiency of developing green seeds. Nature 2004, 432:779-782.
- [21]Alonso AP, Raymond P, Hernould M, Rondeau-Mouro C, De Graaf A, Chourey P, Lahaye M, Shachar-Hill Y, Rolin D, Dieuaide-Noubhani M: A metabolic flux analysis to study the role of sucrose synthase in the regulation of the carbon partitioning in central metabolism in maize root tips. Metab Eng 2007, 9:419-432.
- [22]Williams TCR, Miguet L, Masakapalli SK, Kruger NJ, Sweetlove LJ, Ratcliffe RG: Metabolic network fluxes in heterotrophic Arabidopsis cells: Stability of the flux distribution under different oxygenation conditions. Plant Physiol 2008, 148:704-718.
- [23]Young JD, Shastri AA, Stephanopoulos G, Morgan JA: Mapping photoautotrophic metabolism with isotopically nonstationary C-13 flux analysis. Metab Eng 2011, 13:656-665.
- [24]Ho LC, Shaw AF: Carbon economy and translocation of C-14 in leaflets of the seventh leaf of tomato during leaf expansion. Ann Bot 1977, 41:833-848.
- [25]Farrar SC, Farrar JF: Carbon fluxes in leaf blades of barley. New Phytol 1985, 100:271-283.
- [26]Dickson RE, Larson PR: Incorporation of 14C-photosynthate into major chemical fractions of source and sink leaves of cottonwood. Plant Physiol 1975, 56:185-193.
- [27]Bieleski RL, Redgwell RJ: Sorbitol versus sucrose as photosynthesis and translocation products in developing apricot leaves. Aust J Plant Physiol 1985, 12:657-668.
- [28]Pumpanen JS, Heinonsalo J, Rasilo T, Hurme KR, Ilvesniemi H: Carbon balance and allocation of assimilated CO2 in Scots pine, Norway spruce, and Silver birch seedlings determined with gas exchange measurements and C-14 pulse labelling. Trees-Struct Funct 2009, 23:611-621.
- [29]Atkinson CJ, Farrar JF: Allocation of photosynthetically-fixed carbon in Festuca ovina L. and Nardus stricta L. New Phytol 1983, 95:519-531.
- [30]DaCosta M, Huang BR: Changes in carbon partitioning and accumulation patterns during drought and recovery for colonial bentgrass, creeping bentgrass, and velvet bentgrass. J Am Soc Hortic Sci 2006, 131:484-490.
- [31]Zeeman SC, Ap Rees T: Changes in carbohydrate metabolism and assimilate export in starch-excess mutants of Arabidopsis. Plant Cell Environ 1999, 22:1445-1453.
- [32]Sun JD, Okita TW, Edwards GE: Modification of carbon partitioning, photosynthetic capacity, and O2 sensitivity in arabidopsis plants with low ADP-glucose pyrophosphorylase activity. Plant Physiol 1999, 119:267-276.
- [33]Draborg H, Villadsen D, Nielsen TH: Transgenic Arabidopsis plants with decreased activity of frustose-6-phosphate,2-kinase/fructose-2,6-bisphosphatase have altered carbon partitioning. Plant Physiol 2001, 126:750-758.
- [34]Lundmark M, Cavaco AM, Trevanion S, Hurry V: Carbon partitioning and export in transgenic Arabidopsis thaliana with altered capacity for sucrose synthesis grown at low temperature: a role for metabolite transporters. Plant Cell and Environ 2006, 29:1703-1714.
- [35]Schneider A, Häusler RE, Kolukisaoglu Ü, Kunze R, van der Graaff E, Schwacke R, Catoni E, Desimone M, Flügge UI: An Arabidopsis thaliana knock-out mutant of the chloroplast triose phosphate/phosphate translocator is severely compromised only when starch synthesis, but not starch mobilisation is abolished. Plant J 2002, 32:685-699.
- [36]Nielsen TH: Intermediary glucan structures formed during starch granule biosynthesis are enriched in short side chains, a dynamic pulse labeling approach. J Biol Chem 2002, 277:20249-20255.
- [37]Larson PR, Dickson RE: Distribution of imported C-14 in developing leaves of eastern cottonwood according to phyllotaxy. Planta 1973, 111:95-112.
- [38]Watson MA, Casper BB: Morphogenetic constraints on patterns of carbon distribution in plants. Annu Rev Ecol Syst 1984, 15:233-258.
- [39]Avery GS: Structure and development of the tobacco leaf. Am J Bot 1933, 20:565-592.
- [40]Jones H, Eagles JE: Translocation of 14carbon within and between leaves. Ann Bot 1962, 26:505-511.
- [41]Donnelly PM, Bonetta D, Tsukaya H, Dengler RE, Dengler NG: Cell cycling and cell enlargement in developing leaves of Arabidopsis. Dev Biol 1999, 215:407-419.
- [42]Andriankaja M, Dhondt S, De Bodt S, Vanhaeren H, Coppens F, De Milde L, Mühlenbock P, Skirycz A, Gonzalez N, Beemster GTS, Inzé D: Exit from proliferation during leaf development in Arabidopsis thaliana: a not-so-gradual process. Dev Cell 2012, 22:64-78.
- [43]Fitzgibbon J, Beck M, Zhou J, Faulkner C, Robatzek S, Oparka K: A developmental framework for complex plasmodesmata formation revealed by large-scale imaging of the Arabidopsis leaf epidermis. Plant Cell 2013, 25:57-70.
- [44]Crafts AS: The mechanism of translocation: Methods of study with C14-labeled 2,4-D. Hilgardia 1956, 26:287-334.
- [45]Busse JS, Evert RF: Vascular differentiation and transition in the seedling of Arabidopsis thaliana (Brassicaceae). Int J Plant Sci 1999, 160:241-251.
- [46]Kang J, Tang J, Donnelly P, Dengler N: Primary vascular pattern and expression of ATHB-8 in shoots of Arabidopsis. New Phytol 2003, 158:443-454.
- [47]Fritz E: Microautoradiographic investigations on bidirectional translocation in phloem of Vicia faba. Planta 1973, 112:169-179.
- [48]Haritatos E, Ayre BG, Turgeon R: Identification of phloem involved in assimilate loading in leaves by the activity of the galactinol synthase promoter. Plant Physiol 2000, 123:929-937.
- [49]Webb JA, Gorham PR: Translocation of photosynthetically assimilated C14 in straight-necked squash. Plant Physiol 1964, 39:663-672.
- [50]Baerenfaller K, Massonnet C, Walsh S, Baginsky S, Bühlmann P, Hennig L, Hirsch-Hoffmann M, Howell KA, Kahlau S, Radziejwoski A, et al.: Systems-based analysis of Arabidopsis leaf growth reveals adaptation to water deficit. Mol Syst Biol 2012, 8:606.
- [51]Szecowka M, Heise R, Tohge T, Nunes-Nesi A, Vosloh D, Huege J, Feil R, Lunn J, Nikoloski Z, Stitt M, et al.: Metabolic fluxes in an iIluminated Arabidopsis rosette. Plant Cell 2013, 25:694-714.
- [52]Barratt DH, Koelling K, Graf A, Pike M, Calder G, Findlay K, Zeeman SC, Smith AM: Callose synthase GSL7 Is necessary for normal phloem transport and inflorescence growth in Arabidopsis. Plant Physiol 2011, 155:328-341.
- [53]Gibeaut DM, Hulett J, Cramer GR, Seemann JR: Maximal biomass of Arabidopsis thaliana using a simple, low-maintenance hydroponic method and favorable environmental conditions. Plant Physiol 1997, 115:317-319.