| Orphanet Journal of Rare Diseases | |
| Specific combination of compound heterozygous mutations in 17β-hydroxysteroid dehydrogenase type 4 (HSD17B4) defines a new subtype of D-bifunctional protein deficiency | |
| Kym M Boycott1  Sacha Ferdinandusse3  Michael T Geraghty1  Dennis E Bulman5  Jacek Majewski2  Ronald J A Wanders3  FORGE Canada Consortium1  Petra A W Mooyer3  Chandree L Beaulieu1  Alex MacKenzie1  Sarah E Lawrence1  Chloe C Gottlieb5  Jeremy Schwartzentruber4  Thea Worthylake1  Hugh J McMillan1  | |
| [1] Children’s Hospital of Eastern Ontario Research Institute, University of Ottawa, Ottawa, ON, Canada;Department of Human Genetics, McGill University, Montréal, QC, Canada;Laboratory Genetic Metabolic Diseases, University of Amsterdam, Amsterdam, The Netherlands;McGill University and Genome Quebec Innovation Centre, Montréal, QC, Canada;Ottawa Hospital Research Institute, University of Ottawa, Ottawa, ON, Canada | |
| 关键词: HSD17B4; Cerebellar ataxia; Peroxisomes; Retinitis pigmentosa; Sensorineural hearing loss; Polyneuropathy; | |
| Others : 864179 DOI : 10.1186/1750-1172-7-90 |
|
| received in 2012-07-14, accepted in 2012-11-12, 发布年份 2012 | |
PDF
|
|
【 摘 要 】
Background
D-bifunctional protein (DBP) deficiency is typically apparent within the first month of life with most infants demonstrating hypotonia, psychomotor delay and seizures. Few children survive beyond two years of age. Among patients with prolonged survival all demonstrate severe gross motor delay, absent language development, and severe hearing and visual impairment. DBP contains three catalytically active domains; an N-terminal dehydrogenase, a central hydratase and a C-terminal sterol carrier protein-2-like domain. Three subtypes of the disease are identified based upon the domain affected; DBP type I results from a combined deficiency of dehydrogenase and hydratase activity; DBP type II from isolated hydratase deficiency and DBP type III from isolated dehydrogenase deficiency. Here we report two brothers (16½ and 14 years old) with DBP deficiency characterized by normal early childhood followed by sensorineural hearing loss, progressive cerebellar and sensory ataxia and subclinical retinitis pigmentosa.
Methods and results
Biochemical analysis revealed normal levels of plasma VLCFA, phytanic acid and pristanic acid, and normal bile acids in urine; based on these results no diagnosis was made. Exome analysis was performed using the Agilent SureSelect 50Mb All Exon Kit and the Illumina HiSeq 2000 next-generation-sequencing (NGS) platform. Compound heterozygous mutations were identified by exome sequencing and confirmed by Sanger sequencing within the dehydrogenase domain (c.101C>T; p.Ala34Val) and hydratase domain (c.1547T>C; p.Ile516Thr) of the 17β-hydroxysteroid dehydrogenase type 4 gene (HSD17B4). These mutations have been previously reported in patients with severe-forms of DBP deficiency, however each mutation was reported in combination with another mutation affecting the same domain. Subsequent studies in fibroblasts revealed normal VLCFA levels, normal C26:0 but reduced pristanic acid beta-oxidation activity. Both DBP hydratase and dehydrogenase activity were markedly decreased but detectable.
Conclusions
We propose that the DBP phenotype seen in this family represents a distinct and novel subtype of DBP deficiency, which we have termed type IV based on the presence of a missense mutation in each of the domains of DBP resulting in markedly reduced but detectable hydratase and dehydrogenase activity of DBP. Given that the biochemical testing in plasma was normal in these patients, this is likely an underdiagnosed form of DBP deficiency.
【 授权许可】
2012 McMillan et al.; licensee BioMed Central Ltd.
【 预 览 】
| Files | Size | Format | View |
|---|---|---|---|
| 20140725085026115.pdf | 1952KB | ||
| 23KB | Image | ||
| 76KB | Image | ||
| 66KB | Image |
【 图 表 】
【 参考文献 】
- [1]Baes M, Huyghe S, Carmeliet P, Declercq PE, Collen D, Mannaerts GP, Van Veldhoven PP: Inactivation of the peroxisomal multifunctional protein-2 in mice impedes the degradation of not only 2-methyl-branched fatty acids and bile acid intermediates but also of very long chain fatty acids. J Biol Chem 2000, 275:16329-16336.
- [2]Dieuaide-Noubhani M, Novikov D, Baumgart E, Vanhooren JC, Fransen M, Goethals M, Vandekerckhove J, Van Veldhoven PP: Further characterization of the peroxisomal 3-hydroxyacyl-CoA dehydrogenases from rat liver. Relationship between the different dehydrogenases and evidence that fatty acids and the C27 bile acids di- and tri-hydroxycoprostanic acids are metabolized by separate multifunctional proteins. Eur J Biochem 1996, 240:660-666.
- [3]Moller G, van Grunsven EG, Wanders RJ, Adamski J: Molecular basis of D-bifunctional protein deficiency. Mol Cell Endocrinol 2001, 171:61-70.
- [4]Ferdinandusse S, Denis S, Mooyer PA, Dekker C, Duran M, Soorani-Lunsing RJ, Boltshauser E, Macaya A, Gartner J, Majoie CB, Barth PG, Wanders RJ, Poll-The BT: Clinical and biochemical spectrum of D-bifunctional protein deficiency. Ann Neurol 2006, 59:92-104.
- [5]Ferdinandusse S, Ylianttila MS, Gloerich J, Koski MK, Oostheim W, Waterham HR, Hiltunen JK, Wanders RJA, Glumoff T: Mutational spectrum of D-bifunctional protein deficiency and structure-based genotype-phenotype analysis. Am J Hum Genet 2006, 78:112-124.
- [6]Wanders RJ, Barth G, Heymans HS: Single peroxisomal enzyme deficiencies. In The molecular and metabolic basis of inherited disease. 8th edition. Edited by Scriver CR, Beaudet AL, Sly WS, Walle D. New York: McGraw-Hill; 2001:3219-3256.
- [7]Pierce SB, Walsh T, Chisholm KM, Lee MK, Thornton AM, Fiumara A, Opitz JM, Levy-Lahad E, Klevit RE, King M-C: Mutations in the DBP-deficiency protein HSD17B4 cause ovarian dysgenesis, hearing loss, and ataxia of Perrault syndrome. Am J Hum Genet 2010, 87:282-288.
- [8]Khan A, Wei XC, Snyder FF, Mah JK, Waterham H, Wanders RJ: Neurodegeneration in D-bifunctional protein deficiency: diagnostic clues and natural history using serial magnetic resonance imaging. Neuroradiology 2010, 52:1163-1166.
- [9]Li H, Durbin R: Fast and accurate short read alignment with burrows-wheeler transform. Bioinformatics 2009, 25:1754-1760.
- [10][http://picard.sourceforge.net/] webcitePicard.
- [11]Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R: The sequence alignment/Map format and SAMtools. Bioinformatics 2009, 25:2078-2079.
- [12]Wang K, Li M, Hakonarson H: ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data. Nucleic Acids Res 2010, 38:e164.
- [13][http://evs.gs.washington.edu/EVS/] webciteNHLBI exome variant server.
- [14][http://sift.bii.a-star.edu.sg/] webciteSIFT.
- [15][http://genetics.bwh.harvard.edu/pph2/] webcitePolyPhen-2.
- [16]Ferdinandusse S, Barker S, Lachlan K, Duran M, Waterham HR, Wanders RJ, Hammans S: Adult peroxisomal acyl-coenzyme A oxidase deficiency with cerebellar and brainstem atrophy. J Neurol Neurosurg Psychiatry 2010, 81:310-312.
- [17]Ferdinandusse S, Kostopoulos P, Denis S, Rusch H, Overmars H, Dillmann U, Reith W, Haas D, Wanders RJ, Duran M, Marziniak M: Mutations in the gene encoding peroxisomal sterol carrier protein X (SCPx) cause leukencephalopathy with dystonia and motor neuropathy. Am J Hum Genet 2006, 78:1046-1052.
PDF