期刊论文详细信息
Virology Journal
Characterization of sequence elements from Malvastrum yellow vein betasatellite regulating promoter activity and DNA replication
Yajuan Qian1  Huwei Hou1  Yaqin Wang1  Xinyue Zhang1  Jie Zhang1 
[1] State Key Laboratory of Rice Biology, Institute of Biotechnology, Zhejiang University, Hangzhou 310029, People's Republic of China
关键词: Promoter;    Malvastrum yellow vein virus;    Betasatellite;    Begomovirus;   
Others  :  1153548
DOI  :  10.1186/1743-422X-9-234
 received in 2012-03-08, accepted in 2012-10-01,  发布年份 2012
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【 摘 要 】

Background

Many monopartite begomoviruses are associated with betasatellites, but only several promoters from which were isolated and studied. In this study, the βC1 promoter from Malvastrum yellow vein betasatellite (MYVB) was characterized and important sequence elements were identified to modulate promoter activity and replication of MYVB.

Results

A 991 nucleotide (nt) fragment upstream of the translation start site of the βC1 open reading frame of MYVB and a series of deletions within this fragment were constructed and fused to the β-glucuronidase (GUS) and green fluorescent protein (GFP) reporter genes, respectively. Agrobacterium-mediated transient expression assays showed that the 991 nt fragment was functional and that a 28 nt region (between −390 nt and −418 nt), which includes a 5′UTR Py-rich stretch motif, was important for promoter activity. Replication assays using Nicotiana benthamiana leaf discs and whole plants showed that deletion of the 5′UTR Py-rich stretch impaired viral satellite replication in the presence of the helper virus. Transgenic assays demonstrated that the 991 nt fragment conferred a constitutive expression pattern in transgenic tobacco plants and that a 214 nt fragment at the 3'-end of this sequence was sufficient to drive this expression pattern.

Conclusion

Our results showed that the βC1 promoter of MYVB displayed a constitutive expression pattern and a 5′UTR Py-rich stretch motif regulated both βC1 promoter activity and MYVB replication.

【 授权许可】

   
2012 Zhang et al.; licensee BioMed Central Ltd.

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【 参考文献 】
  • [1]Briddon RW, Bull SE, Amin I, Idris AM, Mansoor S, Bedford ID, Dhawan P, Rishi N, Siwatch SS, Abdel-Salam AM, Brown JK, Zafar Y, Markham PG: Diversity of DNAβ: a satellite molecule associated with some monopartite begomoviruses. Virology 2003, 312:106-121.
  • [2]Saunders K, Bedford ID, Briddon RW, Markham PG, Wong SM, Stanley J: A unique virus complex caused Ageratum yellow vein disease. Proc Natl Acad Sci USA 2000, 97:6890-6895.
  • [3]Zhou X, Xie Y, Tao X, Zhang Z, Li Z, Fauquet CM: Characterization of DNAβ associated with begomoviruses in China and evidence for co-evolution with their cognate viral DNA-A. J Gen Virol 2003, 84:237-247.
  • [4]Briddon RW, Mansoor S, Bedford ID, Pinner MS, Saunders K, Stanley J: Identification of DNA components required for induction of cotton leaf curl disease. Virology 2001, 285:234-243.
  • [5]Cui X, Tao X, Xie Y, Fauquet CM, Zhou X: A DNAβ associated with Tomato yellow leaf curl China virus is required for symptom induction. J Virol 2004, 78:13966-13974.
  • [6]Saunders K, Norman A, Gucciardo S, Stanley J: The DNAβ satellite component associated with Ageratum yellow vein disease encodes an essential pathogenicity protein (βC1). Virology 2004, 324:37-47.
  • [7]Yang JY, Iwasaki M, Machida C, Machida Y, Zhou X, Chua NH: βC1, the pathogenicity factor of TYLCCNV, interacts with AS1 to alter leaf development and suppress selective jasmonic acid responses. Genes Dev 2008, 22:2564-2577.
  • [8]Dry I, Krake L, Mullineaux P, Rezaian A: Regulation of tomato leaf curl viral gene expression in host tissues. Mol Plant Microbe Interact 2000, 13:529-537.
  • [9]Eagle PA, Hanley-Bowdoin L: Cis elements that contribute to geminivirus transcriptional regulation and the efficiency of DNA replication. J Virol 1997, 71:6947-6955.
  • [10]Eini O, Behjatnia SA, Dogra S, Dry IB, Randles JW, Rezaian MA: Identification of sequence elements regulating promoter activity and replication of a monopartite begomovirus-associated DNAβ satellite. J Gen Virol 2009, 90:253-260.
  • [11]Shung CY, Sunter J, Sirasanagandla SS, Sunter G: Distinct viral sequence elements are necessary for expression of Tomato golden mosaic virus complementary sense transcripts that direct AL2 and AL3 gene expression. Mol Plant Microbe Interact 2006, 19:1394-1405.
  • [12]Sunter G, Bisaro DM: Identification of a minimal sequence required for activation of the Tomato golden mosaic virus coat protein promoter in protoplasts. Virology 2003, 305:452-462.
  • [13]Sunter G, Bisaro DM: Regulation of a geminivirus coat protein promoter by AL2 protein (TrAP): evidence for activation and depression mechanisms. Virology 1997, 232:269-280.
  • [14]Guan C, Zhou X: Phloem specific promoter from a satellite associated with a DNA virus. Virus Res 2006, 115:150-157.
  • [15]Guo W, Jiang T, Zhang X, Li G, Zhou X: Molecular variation of satellite DNAβ molecules associated with Malvastrum yellow vein virus and their role in pathogenicity. Appl Environ Microbiol 2008, 74:1909-1913.
  • [16]Bian C, Ruan Q, Peng Z, Ji H, Jiang L, Li J, Yuan L: Cloning, expression and characterization of the putative nuclear transport factor 2 (NTF2) gene from moss Conocephalum conicum (L.) Dum. Mol Biol Rep 2011, 38:2023-2032.
  • [17]Choudhury SR, Roy S, Sengupta DN: A comparative study of cultivar differences in sucrose phosphate synthase gene expression and sucrose formation during banana fruit ripening. Postharvest Biol Tec 2009, 54:15-24.
  • [18]Du H, Zhang Z, Li J: Isolation and functional characterization of a waterlogging-induced promoter from maize. Plant Cell Rep 2010, 29:1269-1275.
  • [19]Ramos PL, Fuentes AD, Quintana Q, Castrillo G, Guevara-Gonzalez RG, Peral R, Rivera-Bustamante RF, Pujol M: Identification of the minimal sequence required for vascular-specific activity of Tomato mottle Taino virus replication-associated protein promoter in transgenic plants. Virus Res 2004, 102:125-132.
  • [20]Armentero MT, Horwitz M, Mermod N: Targeting of DNA polymerase to the adenovirus origin of DNA replication by interaction with nuclear factor I. Proc Natl Acad Sci USA 1994, 91:11537-11541.
  • [21]DePamphilis ML: How transcription factors regulate origins of DNA replication in eukaryotic cells. Trends Cell Biol 1993, 3:161-167.
  • [22]Ito K, Asano M, Hughes P, Kohzaki H, Kerppola T, Curran T, Murakami Y, Ito Y: c-Jun stimulates origin-dependent DNA unwinding by polyomavirus large T antigen. EMBO J 1996, 15:5636-5646.
  • [23]Lue NF, Kornberg RD: A possible role for the yeast TATA-element-binding protein in DNA replication. Proc Natl Acad Sci USA 1993, 90:8018-8022.
  • [24]Hur J, Choi E, Buckley KJ, Lee S, Davis KR: Identification of a promoter motif involved in Curtovirus sense-gene expression in transgenic Arabidopsis. Mol Cells 2008, 26:131-139.
  • [25]Sardo L, Lucioli A, Tavazza M, Masenga V, Tavazza R, Accotto PG, Noris E: An RGG sequence in the replication-associated protein (Rep) of Tomato yellow leaf curl Sardinia virus is involved in transcriptional repression and severely impacts resistance in Rep-expressing plants. J Gen Virol 2011, 92:204-209.
  • [26]Tu J, Sunter G: A conserved binding site within the Tomato golden mosaic virus AL-1629 promoter is necessary for expression of viral genes important for pathogenesis. Virology 2007, 367:117-125.
  • [27]Ding C, Qing L, Li Z, Qian Y, Zhou X: Genetic determinants of symptoms on viral DNA satellites. Appl Environ Microbiol 2009, 75:5380-5389.
  • [28]Dinant S, Ripoll C, Pieper M, David C: Phloem specific expression driven by wheat dwarf geminivirus V-sense promoter in transgenic dicotyledonous species. Physiol Plantarum 2004, 121:108-116.
  • [29]Xie Y, Liu Y, Meng M, Chen L, Zhu Z: Isolation and identification of a super strong plant promoter from Cotton leaf curl Multan virus. Plant Mol Biol 2003, 53:1-14.
  • [30]Yin Y, Chen L, Beachy R: Promoter elements required for phloem-specific gene expression from the RTBV promoter in rice. Plant J 1997, 12:1179-1188.
  • [31]Yang Y, Li R, Qi M: In vivo analysis of plant promoters and transcription factors by agroinfiltration of tobacco leaves. Plant J 2000, 22:543-551.
  • [32]Dry IB, Krake LR, Rigden JE, Rezaian MA: A novel subviral agent associated with a geminivirus: the first report of a DNA satellite. Proc Natl Acad Sci USA 1997, 94:7088-7093.
  • [33]Pratap D, Kashikar AR, Mukherjee SK: Molecular characterization and infectivity of aTomato leaf curl new Delhi virusvariant associated with newly emerging yellow mosaic disease of egg plant in India. Virol J 2011, 8:305. BioMed Central Full Text
  • [34]Horsch RB, Fry JE, Hoffman NL, Eichholtz D, Rogers SG, Fraley RT: A simple and general method for transferring genes into plants. Science 1985, 227:1229-1231.
  • [35]Jefferson RA, Kavanagh TA, Bevan MW: GUS fusions: β-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J 1987, 6:3901-3907.
  • [36]Glauert AM: Practical Methods in Electron Microscopy. Specimen Preparation Mater Sci 1972, I:1.
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