| Orphanet Journal of Rare Diseases | |
| MRI characterisation of adult onset alpha-methylacyl-coA racemase deficiency diagnosed by exome sequencing | |
| Laurence A Bindoff4  Per Morten Knappskog2  Helge Boman2  Gesche Neckelmann3  Cecilie Bredrup1  Bjørn Ivar Haukanes2  Charalampos Tzoulis4  Stefan Johansson2  Kristoffer Haugarvoll4  | |
| [1] Department of Ophthalmology, Haukeland University Hospital, Bergen, Norway;Center for Medical Genetics and Molecular Medicine, Haukeland University Hospital, Bergen, Norway;Department of Radiology, Haukeland University Hospital, Bergen, Norway;Department of Clinical Medicine, University of Bergen, Bergen, Norway | |
| 关键词: Pigmentary retinopathy; Peripheral neuropathy; Tremor; Metabolic disorders; Peroxisomal disorders; Ataxia; Next generation sequencing; Seizures; AMACR gene; | |
| Others : 864164 DOI : 10.1186/1750-1172-8-1 |
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| received in 2012-10-30, accepted in 2012-12-27, 发布年份 2013 | |
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【 摘 要 】
Background
Correct diagnosis is pivotal to understand and treat neurological disease. Herein, we report the diagnostic work-up utilizing exome sequencing and the characterization of clinical features and brain MRI in two siblings with a complex, adult-onset phenotype; including peripheral neuropathy, epilepsy, relapsing encephalopathy, bilateral thalamic lesions, type 2 diabetes mellitus, cataract, pigmentary retinopathy and tremor.
Methods
We applied clinical and genealogical investigations, homozygosity mapping and exome sequencing to establish the diagnosis and MRI to characterize the cerebral lesions.
Results
A recessive genetic defect was suspected in two siblings of healthy, but consanguineous parents. Homozygosity mapping revealed three shared homozygous regions and exome sequencing, revealed a novel homozygous c.367 G>A [p.Asp123Asn] mutation in the α-methylacyl-coA racemase (AMACR) gene in both patients. The genetic diagnosis of α-methylacyl-coA racemase deficiency was confirmed by demonstrating markedly increased pristanic acid levels in blood (169 μmol/L, normal <1.5 μmol/L). MRI studies showed characteristic degeneration of cerebellar afferents and efferents, including the dentatothalamic tract and thalamic lesions in both patients.
Conclusions
Metabolic diseases presenting late are diagnostically challenging. We show that appropriately applied, homozygosity mapping and exome sequencing can be decisive for establishing diagnoses such as late onset α-methylacyl-coA racemase deficiency, an autosomal recessive peroxisomal disorder with accumulation of pristanic acid. Our study also highlights radiological features that may assist in diagnosis. Early diagnosis is important as patients with this disorder may benefit from restricted dietary phytanic and pristanic acid intake.
【 授权许可】
2013 Haugarvoll et al.; licensee BioMed Central Ltd.
【 预 览 】
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【 参考文献 】
- [1]Bamshad MJ, Ng SB, Bigham AW, Tabor HK, Emond MJ, Nickerson DA, Shendure J: Exome sequencing as a tool for Mendelian disease gene discovery. Nat Rev Genet 2011, 12:745-755.
- [2]Gilissen C, Hoischen A, Brunner HG, Veltman JA: Disease gene identification strategies for exome sequencing. Eur J Hum Genet: EJHG 2012, 20:490-497.
- [3]Ku CS, Cooper DN, Polychronakos C, Naidoo N, Wu M, Soong R: Exome sequencing: dual role as a discovery and diagnostic tool. Ann Neurol 2012, 71:5-14.
- [4]Sailer A, Scholz SW, Gibbs JR, Tucci A, Johnson JO, Wood NW, Plagnol V, Hummerich H, Ding J, Hernandez D, et al.: Exome sequencing in an SCA14 family demonstrates its utility in diagnosing heterogeneous diseases. Neurology 2012, 79:127-131.
- [5]Neveling K, Collin RW, Gilissen C, van Huet RA, Visser L, Kwint MP, Gijsen SJ, Zonneveld MN, Wieskamp N, de Ligt J, et al.: Next-generation genetic testing for retinitis pigmentosa. Hum Mutat 2012, 33:963-972.
- [6]Pierson TM, Adams DA, Markello T, Golas G, Yang S, Sincan M, Simeonov DR, Fuentes Fajardo K, Hansen NF, Cherukuri PF, et al.: Exome sequencing as a diagnostic tool in a case of undiagnosed juvenile-onset GM1-gangliosidosis. Neurology 2012, 79:123-126.
- [7]Clarke CE, Alger S, Preece MA, Burdon MA, Chavda S, Denis S, Ferdinandusse S, Wanders RJ: Tremor and deep white matter changes in alpha-methylacyl-CoA racemase deficiency. Neurology 2004, 63:188-189.
- [8]Dick D, Horvath R, Chinnery PF: AMACR mutations cause late-onset autosomal recessive cerebellar ataxia. Neurology 2011, 76:1768-1770.
- [9]Ferdinandusse S, Denis S, Clayton PT, Graham A, Rees JE, Allen JT, McLean BN, Brown AY, Vreken P, Waterham HR, Wanders RJ: Mutations in the gene encoding peroxisomal alpha-methylacyl-CoA racemase cause adult-onset sensory motor neuropathy. Nat Genet 2000, 24:188-191.
- [10]Kapina V, Sedel F, Truffert A, Horvath J, Wanders RJ, Waterham HR, Picard F: Relapsing rhabdomyolysis due to peroxisomal alpha-methylacyl-coa racemase deficiency. Neurology 2010, 75:1300-1302.
- [11]McLean BN, Allen J, Ferdinandusse S, Wanders RJ: A new defect of peroxisomal function involving pristanic acid: a case report. J Neurol Neurosurg Psychiatry 2002, 72:396-399.
- [12]Smith EH, Gavrilov DK, Oglesbee D, Freeman WD, Vavra MW, Matern D, Tortorelli S: An adult onset case of alpha-methyl-acyl-CoA racemase deficiency. J Inherit Metab Dis 2010. Epub ahead of print
- [13]Thompson SA, Calvin J, Hogg S, Ferdinandusse S, Wanders RJ, Barker RA: Relapsing encephalopathy in a patient with alpha-methylacyl-CoA racemase deficiency. J Neurol Neurosurg Psychiatry 2008, 79:448-450.
- [14]Stewart MW, Vavra MW, Whaley NR: Fundus findings in a patient with α-methlyacyl-coa racemase deficiency. Retinal Cases and Brief Reports 2011, 5:262-266.
- [15]Ferdinandusse S, Kostopoulos P, Denis S, Rusch H, Overmars H, Dillmann U, Reith W, Haas D, Wanders RJ, Duran M, Marziniak M: Mutations in the gene encoding peroxisomal sterol carrier protein X (SCPx) cause leukencephalopathy with dystonia and motor neuropathy. Am J Hum Genet 2006, 78:1046-1052.
- [16]Ferdinandusse S, Overmars H, Denis S, Waterham HR, Wanders RJ, Vreken P: Plasma analysis of di- and trihydroxycholestanoic acid diastereoisomers in peroxisomal alpha-methylacyl-CoA racemase deficiency. J Lipid Res 2001, 42:137-141.
- [17]Wanders RJ, Komen J, Ferdinandusse S: Phytanic acid metabolism in health and disease. Biochim Biophys Acta 2011, 1811:498-507.
- [18]Wanders RJ: Peroxisomes, lipid metabolism, and peroxisomal disorders. Mol Genet Metab 2004, 83:16-27.
- [19]Ferdinandusse S, Denis S, Mooyer PA, Dekker C, Duran M, Soorani-Lunsing RJ, Boltshauser E, Macaya A, Gartner J, Majoie CB, et al.: Clinical and biochemical spectrum of D-bifunctional protein deficiency. Ann Neurol 2006, 59:92-104.
- [20]Granse L, Ponjavic V, Andreasson S: Full-field ERG, multifocal ERG and multifocal VEP in patients with retinitis pigmentosa and residual central visual fields. Acta Ophthalmol Scand 2004, 82:701-706.
- [21]Purcell S, Neale B, Todd-Brown K, Thomas L, Ferreira MA, Bender D, Maller J, Sklar P, de Bakker PI, Daly MJ, Sham PC: PLINK: a tool set for whole-genome association and population-based linkage analyses. Am J Hum Genet 2007, 81:559-575.
- [22]Li H, Durbin R: Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 2009, 25:1754-1760.
- [23]McKenna A, Hanna M, Banks E, Sivachenko A, Cibulskis K, Kernytsky A, Garimella K, Altshuler D, Gabriel S, Daly M, DePristo MA: The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data. Genome Res 2010, 20:1297-1303.
- [24]Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R, Genome Project Data Processing S: The Sequence Alignment/Map format and SAMtools. Bioinformatics 2009, 25:2078-2079.
- [25]Wang K, Li M, Hakonarson H: ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data. Nucleic Acids Res 2010, 38:e164.
- [26]Tzoulis C, Neckelmann G, Mork SJ, Engelsen BE, Viscomi C, Moen G, Ersland L, Zeviani M, Bindoff LA: Localized cerebral energy failure in DNA polymerase gamma-associated encephalopathy syndromes. Brain: J Neurol 2010, 133:1428-1437.
- [27]Yokota T, Hirashima F, Furukawa T, Tsukagoshi H, Yoshikawa H: MRI findings of inferior olives in palatal myoclonus. J Neurol 1989, 236:115-116.
- [28]Setchell KD, Heubi JE, Bove KE, O’Connell NC, Brewsaugh T, Steinberg SJ, Moser A, Squires RH Jr: Liver disease caused by failure to racemize trihydroxycholestanoic acid: gene mutation and effect of bile acid therapy. Gastroenterology 2003, 124:217-232.
- [29]Van Veldhoven PP, Meyhi E, Squires RH, Fransen M, Fournier B, Brys V, Bennett MJ, Mannaerts GP: Fibroblast studies documenting a case of peroxisomal 2-methylacyl-CoA racemase deficiency: possible link between racemase deficiency and malabsorption and vitamin K deficiency. Eur J Clin Invest 2001, 31:714-722.
- [30]Botstein D, Risch N: Discovering genotypes underlying human phenotypes: past successes for mendelian disease, future approaches for complex disease. Nat Genet 2003, 33(Suppl):228-237.
- [31]van der Knaap MS, van der Voorn P, Barkhof F, Van Coster R, Krageloh-Mann I, Feigenbaum A, Blaser S, Vles JS, Rieckmann P, Pouwels PJ: A new leukoencephalopathy with brainstem and spinal cord involvement and high lactate. Ann Neurol 2003, 53:252-258.
- [32]Saneto RP, Friedman SD, Shaw DW: Neuroimaging of mitochondrial disease. Mitochondrion 2008, 8:396-413.
- [33]Ronicke S, Kruska N, Kahlert S, Reiser G: The influence of the branched-chain fatty acids pristanic acid and Refsum disease-associated phytanic acid on mitochondrial functions and calcium regulation of hippocampal neurons, astrocytes, and oligodendrocytes. Neurobiol Dis 2009, 36:401-410.
- [34]Kruska N, Reiser G: Phytanic acid and pristanic acid, branched-chain fatty acids associated with Refsum disease and other inherited peroxisomal disorders, mediate intracellular Ca2+ signaling through activation of free fatty acid receptor GPR40. Neurobiol Dis 2011, 43:465-472.
- [35]Hungerbuhler JP, Meier C, Rousselle L, Quadri P, Bogousslavsky J: Refsum’s disease: management by diet and plasmapheresis. Eur Neurol 1985, 24:153-159.
- [36]Wierzbicki AS: Peroxisomal disorders affecting phytanic acid alpha-oxidation: a review. Biochem Soc Trans 2007, 35:881-886.
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