期刊论文详细信息
| GigaScience | |
| On the evolving portfolio of community-standards and data sharing policies: turning challenges into new opportunities | |
| Philippe Rocca-Serra1  Susanna-Assunta Sansone1  | |
| [1] Oxford e-Research Centre, University of Oxford, Oxford, UK | |
| 关键词: BioSharing; ISA-Tab; ISA commons; Data policy; Curation; Data sharing; Ontology; Standard; | |
| Others : 861910 DOI : 10.1186/2047-217X-1-10 |
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| received in 2012-05-31, accepted in 2012-07-12, 发布年份 2012 | |
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【 授权许可】
2012 Sansone and Rocca-Serra; licensee BioMed Central Ltd.
【 预 览 】
| Files | Size | Format | View |
|---|---|---|---|
| 20140725005359106.pdf | 149KB |
【 参考文献 】
- [1]Field D, Sansone SA, Collis A, Booth T, Dukes P, Gregurick SK, Kennedy K, Kolar P, Kolker E, Maxon M, Millard S, Mugabushaka AM, Perrin N, Remacle JE, Remington K, Rocca-Serra P, Taylor CF, Thorley M, Tiwari B, Wilbanks J: Megascience. 'Omics data sharing. Science 2009, 326(5950):234-236.
- [2]BioSharing. http://biosharing.org.
- [3]Taylor CF, Field D, Sansone SA, Aerts J, Apweiler R, Ashburner M, Ball CA, Binz PA, Bogue M, Booth T, Brazma A, Brinkman RR, Michael Clark A, Deutsch EW, Fiehn O, Fostel J, Ghazal P, Gibson F, Gray T, Grimes G, Hancock JM, Hardy NW, Hermjakob H, Julian RK, Kane M, Kettner C, Kinsinger C, Kolker E, Kuiper M, Le Novère N, et al.: Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project. Nat Biotechnol 2008, 26(8):889-896.
- [4]Smith B, Ashburner M, Rosse C, Bard J, Bug W, Ceusters W, Goldberg LJ, Eilbeck K, Ireland A, Mungall CJ, Consortium OBI, Leontis N, Rocca-Serra P, Ruttenberg A, Sansone SA, Scheuermann RH, Shah N, Whetzel PL, Lewis S: The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration. Nat Biotechnol 2007, 25(11):1251-1255.
- [5]Harland L, Larminie C, Sansone SA, Popa S, Marshall MS, Braxenthaler M, Cantor M, Filsell W, Forster MJ, Huang E, Matern A, Musen M, Saric J, Slater T, Wilson J, Lynch N, Wise J, Dix I: Empowering industrial research with shared biomedical vocabularies. Drug Discov Today 2011, 16(21–22):940-947.
- [6]Gilbert JA, Bao Y, Wang H, Sansone SA, Edmunds SC, Morrison N, Schriml LM, Davies N, Sterk P, Garrity GM, Field D, Robbins R: The Meeting Report for the 13th Genomic Standards Consortium meeting, Shenzhen, China, March 4th-7th 2012. [http://dx.doi.org/10.4056/sigs] webciteStand Genomic Sci 2012, 6(2):2876184.
- [7][http:/ / blogs.openaccesscentral.com/ blogs/ bmcblog/ entry/ report_from_the_publishing_open] webcite
- [8]Alsheikh-Ali AA, Qureshi W, Al-Mallah MH, Ioannidis JP: Public availability of published research data in high-impact journals. PLoS One 2011, 6(9):e24357.
- [9]Gaudet P, Bairoch A, Field D, Sansone SA, Taylor C, Attwood TK, Bateman A, Blake JA, Bult CJ, Cherry JM, Chisholm RL, Cochrane G, Cook CE, Eppig JT, Galperin MY, Gentleman R, Goble CA, Gojobori T, Hancock JM, Howe DG, Imanishi T, Kelso J, Landsman D, Lewis SE, Mizrachi IK, Orchard S, Ouellette BF, Ranganathan S, Richardson L, Rocca-Serra P, et al.: Towards BioDBcore: a community-defined information specification for biological databases. Nucleic Acids Res 2011, 39(Database issue):D7-10.
- [10]Sansone SA, Rocca-Serra P, Field D, Maguire E, Taylor C, Hofmann O, Fang H, Neumann S, Tong W, Amaral-Zettler L, Begley K, Booth T, Bougueleret L, Burns G, Chapman B, Clark T, Coleman LA, Copeland J, Das S, de Daruvar A, de Matos P, Dix I, Edmunds S, Evelo CT, Forster MJ, Gaudet P, Gilbert J, Goble C, Griffin JL, Jacob D, et al.: Toward interoperable bioscience data. Nat Genet 2012, 27;44(2):121-126.
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