期刊论文详细信息
Clinical Epigenetics
DNA methylation signature of interleukin 1 receptor type II in asthma
Catherine Laprise2  Luigi Bouchard1  Anne-Marie Boucher-Lafleur2  Simon-Pierre Guay1  Valérie Gagné-Ouellet2 
[1] ECOGENE-21 and Lipid Clinic, Hôpital de Chicoutimi, Saguenay, QC, Canada;Département des sciences fondamentales, Université du Québec à Chicoutimi, Saguenay, QC, Canada
关键词: Atopy;    Asthma;    IL1R2;    IL1R1;    IL1;    Methylation;    Epigenetics;   
Others  :  1225920
DOI  :  10.1186/s13148-015-0114-0
 received in 2015-04-30, accepted in 2015-07-13,  发布年份 2015
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【 摘 要 】

Interleukin 1 and its receptors are associated with allergic diseases such as asthma. In the present study, we measured DNA methylation at the IL1R1 and IL1R2 gene loci and assessed for associations with asthma-related phenotypes and gene expressions. We found that asthmatic and atopic individuals have higher IL1R2 promoter DNA methylation than control subjects. Additionally, we observed a negative correlation between DNA methylation at the IL1R2 promoter and IL1R2 mRNA expression. These results suggest for the first time that IL1R2 promoter DNA methylation is associated with its gene repression in allergic diseases such as asthma.

【 授权许可】

   
2015 Gagné-Ouellet et al.

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【 参考文献 】
  • [1]Dinarello CA: Biologic basis for interleukin-1 in disease. Blood 1996, 87:2095-147.
  • [2]Daley D, Lemire M, Akhabir L, Chan-Yeung M, He JQ, McDonald T, Sandford A, Stefanowicz D, Tripp B, Zamar D, et al.: Analyses of associations with asthma in four asthma population samples from Canada and Australia. Hum Genet 2009, 125:445-59.
  • [3]Daley D, Park JE, He JQ, Yan J, Akhabir L, Stefanowicz D, Becker AB, Chan-Yeung M, Bosse Y, Kozyrskyj AL, et al.: Associations and interactions of genetic polymorphisms in innate immunity genes with early viral infections and susceptibility to asthma and asthma-related phenotypes. J Allergy Clin Immunol 2012, 130:1284-93.
  • [4]Laprise C, Sladek R, Ponton A, Bernier MC, Hudson TJ, Laviolette M: Functional classes of bronchial mucosa genes that are differentially expressed in asthma. BMC Genomics 2004, 5:21. BioMed Central Full Text
  • [5]Chamberland A, Madore A-M, Tremblay K, Laviolette M, Laprise C: A comparison of two sets of microarray experiments to define allergic asthma expression pattern. Exp Lung Res 2009, 35:399-410.
  • [6]Pociot F, Molvig J, Wogensen L, Worsaae H, Nerup J: A TaqI polymorphism in the human interleukin-1 beta (IL-1 beta) gene correlates with IL-1 beta secretion in vitro. Eur J Clin Invest 1992, 22:396-402.
  • [7]Morales E, Bustamante M, Vilahur N, Escaramis G, Montfort M, de Cid R, Garcia-Esteban R, Torrent M, Estivill X, Grimalt JO, et al.: DNA hypomethylation at ALOX12 is associated with persistent wheezing in childhood. Am J Respir Crit Care Med 2012, 185:937-43.
  • [8]Reinius LE, Gref A, Saaf A, Acevedo N, Joerink M, Kupczyk M, D’Amato M, Bergstrom A, Melen E, Scheynius A, et al.: DNA methylation in the neuropeptide S receptor 1 (NPSR1) promoter in relation to asthma and environmental factors. PLoS One 2013, 8:e53877.
  • [9]Naumova AK, Al Tuwaijri A, Morin A, Vaillancourt VT, Madore AM, Berlivet S, Kohan-Ghadr HR, Moussette S, Laprise C: Sex- and age-dependent DNA methylation at the 17q12-q21 locus associated with childhood asthma. Hum Genet 2013, 132:811-22.
  • [10]Wang IJ, Karmaus WJ, Chen SL, Holloway JW, Ewart S: Effects of phthalate exposure on asthma may be mediated through alterations in DNA methylation. Clin Epigenetics 2015, 7:27. BioMed Central Full Text
  • [11]Seumois G, Chavez L, Gerasimova A, Lienhard M, Omran N, Kalinke L, Vedanayagam M, Ganesan AP, Chawla A, Djukanovic R, et al.: Epigenomic analysis of primary human T cells reveals enhancers associated with TH2 memory cell differentiation and asthma susceptibility. Nat Immunol 2014, 15:777-88.
  • [12]Yang IV, Pedersen BS, Liu A, O’Connor GT, Teach SJ, Kattan M, Misiak RT, Gruchalla R, Steinbach SF, Szefler SJ, et al.: DNA methylation and childhood asthma in the inner city. J Allergy Clin Immunol 2015, 136:69-80.
  • [13]Laprise C: The Saguenay-Lac-Saint-Jean asthma familial collection: the genetics of asthma in a young founder population. Genes Immun 2014, 15:247-55.
  • [14]Smith AJ, Keen LJ, Billingham MJ, Perry MJ, Elson CJ, Kirwan JR, Sims JE, Doherty M, Spector TD, Bidwell JL: Extended haplotypes and linkage disequilibrium in the IL1R1-IL1A-IL1B-IL1RN gene cluster: association with knee osteoarthritis. Genes Immun 2004, 5:451-60.
  • [15]Lin SY, Hsieh SC, Lin YC, Lee CN, Tsai MH, Lai LC, Chuang EY, Chen PC, Hung CC, Chen LY, et al.: A whole genome methylation analysis of systemic lupus erythematosus: hypomethylation of the IL10 and IL1R2 promoters is associated with disease activity. Genes Immun 2012, 13:214-20.
  • [16]Wang T, Liang ZA, Sandford AJ, Xiong XY, Yang YY, Ji YL, He JQ: Selection of suitable housekeeping genes for real-time quantitative PCR in CD4(+) lymphocytes from asthmatics with or without depression. PLoS One 2012, 7:e48367.
  • [17]Shen TC, Tu CY, Lin CL, Wei CC, Li YF: Increased risk of asthma in patients with systemic lupus erythematosus. Am J Respir Crit Care Med 2014, 189:496-9.
  • [18]Blattler A, Farnham PJ: Cross-talk between site-specific transcription factors and DNA methylation states. J Biological Chemistry 2013, 288:34287-94.
  • [19]Turker MS: Gene silencing in mammalian cells and the spread of DNA methylation. Oncogene 2002, 21:5388-93.
  • [20]Acuner Ozbabacan SE, Gursoy A, Nussinov R, Keskin O: The structural pathway of interleukin 1 (IL-1) initiated signaling reveals mechanisms of oncogenic mutations and SNPs in inflammation and cancer. PLoS Comput Biol 2014, 10:e1003470.
  • [21]Colotta F, Re F, Muzio M, Bertini R, Polentarutti N, Sironi M, Giri JG, Dower SK, Sims JE, Mantovani A: Interleukin-1 type II receptor: a decoy target for IL-1 that is regulated by IL-4. Science 1993, 261:472-5.
  • [22]Colotta F, Dower SK, Sims JE, Mantovani A: The type II ‘decoy’ receptor: a novel regulatory pathway for interleukin 1. Immunol Today 1994, 15:562-6.
  • [23]Garlanda C, Dinarello CA, Mantovani A: The interleukin-1 family: back to the future. Immunity 2013, 39:1003-18.
  • [24]Sims JE, Gayle MA, Slack JL, Alderson MR, Bird TA, Giri JG, Colotta F, Re F, Mantovani A, Shanebeck K, et al.: Interleukin 1 signaling occurs exclusively via the type I receptor. Proc Natl Acad Sci U S A 1993, 90:6155-9.
  • [25]Islam SA, Luster AD: T cell homing to epithelial barriers in allergic disease. Nat Med 2012, 18:705-15.
  • [26]Paul WE. History of interleukin-4. Cytokine 2015.. doi:10.1016/j.cyto.2015.01.038 webcite
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