BMC Veterinary Research | |
The ESR1 gene is associated with risk for canine mammary tumours | |
Frode Lingaas6  Kerstin Lindblad-Toh3  Henrik von Euler1  Matthew Thomas Webster5  Stein Istre Thoresen2  Patricio Rivera4  Malin Melin5  Kaja Sverdrup Borge6  | |
[1] Department of Clinical Sciences, Swedish University of Agricultural Sciences, Uppsala, Sweden;Section for Clinical Pathology, Department of Basic Sciences and Aquatic Medicine, Norwegian School of Veterinary Science, Oslo, Norway;Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA, 02139, USA;Currently: Bagarmossen Animal Hospital, Stockholm, Sweden;Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden;Section of Genetics, Department of Basic Sciences and Aquatic Medicine, Norwegian School of Veterinary Science, P.O Box 8146 Dep., 0033 Oslo, Norway | |
关键词: Estrogen receptor; Mammary tumour; Association; Risk; Allele frequency; Single nucleotide polymorphism; Dog; | |
Others : 1119569 DOI : 10.1186/1746-6148-9-69 |
|
received in 2012-10-29, accepted in 2013-03-25, 发布年份 2013 | |
【 摘 要 】
Background
The limited within-breed genetic heterogeneity and an enrichment of disease-predisposing alleles have made the dog a very suitable model for the identification of genes associated with risk for specific diseases. Canine mammary cancer is an example of such a disease. However, the underlying inherited risk factors for canine mammary tumours (CMTs) are still largely unknown. In this study, 52 single nucleotide polymorphisms (SNPs) in ten human cancer-associated genes were genotyped in two different datasets in order to identify genes/alleles associated with the development of CMTs. The first dataset consisted of English Springer Spaniel (ESS) CMT cases and controls. ESS is a dog breed known to be at increased risk of developing CMTs. In the second dataset, dogs from breeds known to have a high frequency of CMTs were compared to dogs from breeds with a lower occurrence of these tumours.
Results
We found significant associations to CMT for SNPs and haplotypes in the estrogen receptor 1 (ESR1) gene in the ESS material (best PBonf = 0.021). A large number of SNPs, among them several SNPs in ESR1, showed significantly different allele frequencies between the high and low risk breed groups (best PBonf = 8.8E-32, best PBPerm = 0.076).
Conclusions
The identification of CMT-associated SNPs in ESR1 in two independent datasets suggests that this gene might be involved in CMT development. These findings also support that CMT may serve as a good model for human breast cancer research.
【 授权许可】
2013 Borge et al.; licensee BioMed Central Ltd.
【 预 览 】
Files | Size | Format | View |
---|---|---|---|
20150208080900296.pdf | 314KB | download | |
Figure 1. | 49KB | Image | download |
【 图 表 】
Figure 1.
【 参考文献 】
- [1]Patterson DF: Companion animal medicine in the age of medical genetics. J Vet Intern Med 2000, 14:1-9.
- [2]Bronden LB, Nielsen SS, Toft N, Kristensen AT: Data from the Danish veterinary cancer registry on the occurrence and distribution of neoplasms in dogs in Denmark. Vet Rec 2010, 166:586-590.
- [3]Egenvall A, Bonnett BN, Ohagen P, Olson P, Hedhammar A, von Euler H: Incidence of and survival after mammary tumors in a population of over 80,000 insured female dogs in Sweden from 1995 to 2002. Prev Vet Med 2005, 69:109-127.
- [4]Boldizsar H, Szenci O, Muray T, Csenki J: Studies on canine mammary tumours. I. Age, seasonal and breed distribution. Acta Vet Hung 1992, 40:75-87.
- [5]Arnesen K, Gamlem H, Glattre E, Grøndalem J, Moe L, Nordstoga K: The Norwegian canine cancer register 1990–1998. Report from the project "Cancer in the dog". EJCAP 2001, 11:159-169.
- [6]Dahl K, Moe L, Indrebø I, Gamlem H: Forekomst av mammatumor hos beslektede boxere [Occurence of mammary tumor in related Boxers]. Nor Vet Tidsskr 2002, 114:615-622.
- [7]Priester WA: Occurrence of mammary neoplasms in bitches in relation to breed, age, tumour type, and geographical region from which reported. J Small Anim Pract 1979, 20:1-11.
- [8]Moe L: Population-based incidence of mammary tumours in some dog breeds. J Reprod Fertil Suppl 2001, 57:439-443.
- [9]Queiroga FL, Raposo T, Carvalho MI, Prada J, Pires I: Canine mammary tumours as a model to study human breast cancer: most recent findings. In Vivo 2011, 25:455-465.
- [10]Owen LN: A comparative study of canine and human breast cancer. Invest Cell Pathol 1979, 2:257-275.
- [11]Rivera P, Melin M, Biagi T, Fall T, Haggstrom J, Lindblad-Toh K, von Euler H: Mammary tumor development in dogs is associated with BRCA1 and BRCA2. Cancer Research 2009, 69:8770-8774.
- [12]Veldhoen N, Watterson J, Brash M, Milner J: Identification of tumour-associated and germ line p53 mutations in canine mammary cancer. Br J Cancer 1999, 81:409-415.
- [13]Borge KS, Borresen-Dale AL, Lingaas F: Identification of genetic variation in 11 candidate genes of canine mammary tumour. Vet Comp Oncol 2011, 9:241-250.
- [14]Ng PC, Henikoff S: Predicting deleterious amino acid substitutions. Genome Res 2001, 11:863-874.
- [15]Jones DR, Schmidt RJ, Pickard RT, Foxworthy PS, Eacho PI: Estrogen receptor-mediated repression of human hepatic lipase gene transcription. J Lipid Res 2002, 43:383-391.
- [16]Ensembl release 67[http://www.ensembl.org/index.html webcite]
- [17]Norris JD, Fan D, Kerner SA, McDonnell DP: Identification of a third autonomous activation domain within the human estrogen receptor. Mol Endocrinol 1997, 11:747-754.
- [18]Herynk MH, Fuqua SA: Estrogen receptor mutations in human disease. Endocr Rev 2004, 25:869-898.
- [19]Kumar R, Zakharov MN, Khan SH, Miki R, Jang H, Toraldo G, Singh R, Bhasin S, Jasuja R: The dynamic structure of the estrogen receptor. J Amino Acids 2011, 2011:812540.
- [20]Dahlman-Wright K, Cavailles V, Fuqua SA, Jordan VC, Katzenellenbogen JA, Korach KS, Maggi A, Muramatsu M, Parker MG, Gustafsson JA: International Union of Pharmacology. LXIV. Estrogen receptors. Pharmacol Rev 2006, 58:773-781.
- [21]Anghel A, Raica M, Narita D, Seclaman E, Nicola T, Ursoniu S, Anghel M, Popovici E: Estrogen receptor alpha polymorphisms: correlation with clinicopathological parameters in breast cancer. Neoplasma 2010, 57:306-315.
- [22]Vasconcelos A, Medeiros R, Veiga I, Pereira D, Carrilho S, Palmeira C, Azevedo C, Lopes CS: Analysis of estrogen receptor polymorphism in codon 325 by PCR-SSCP in breast cancer: association with lymph node metastasis. Breast J 2002, 8:226-229.
- [23]Kallel I, Rebai M, Khabir A, Farid NR, Rebai A: Genetic polymorphisms in the EGFR (R521K) and estrogen receptor (T594T) genes, EGFR and ErbB-2 protein expression, and breast cancer risk in Tunisia. J Biomed Biotechnol 2009, 2009:753683.
- [24]Toniti W, Suthiyotha N, Puchadapirom P, Jenwitheesuk E: Binding capacity of ER-alpha ligands and SERMs: comparison of the human, dog and cat. Asian Pac J Cancer Prev 2011, 12:2875-2879.
- [25]Tapper W, Hammond V, Gerty S, Ennis S, Simmonds P, Collins A, Eccles D: The influence of genetic variation in 30 selected genes on the clinical characteristics of early onset breast cancer. Breast Cancer Res 2008, 10:R108. BioMed Central Full Text
- [26]Montano MM, Muller V, Trobaugh A, Katzenellenbogen BS: The carboxy-terminal F domain of the human estrogen receptor: role in the transcriptional activity of the receptor and the effectiveness of antiestrogens as estrogen antagonists. Mol Endocrinol 1995, 9:814-825.
- [27]Goldschmidt M, Pena L, Rasotto R, Zappulli V: Classification and grading of canine mammary tumors. Vet Pathol 2011, 48:117-131.
- [28]Karlsson EK, Lindblad-Toh K: Leader of the pack: gene mapping in dogs and other model organisms. Nat Rev Genet 2008, 9:713-725.
- [29]Purcell S, Neale B, Todd-Brown K, Thomas L, Ferreira MA, Bender D, Maller J, Sklar P, de Bakker PI, Daly MJ, Sham PC: PLINK: a tool set for whole-genome association and population-based linkage analyses. Am J Hum Genet 2007, 81:559-575.
- [30]PLINK (version 1.07)[http://pngu.mgh.harvard.edu/purcell/plink/ webcite]
- [31]Barrett JC, Fry B, Maller J, Daly MJ: Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics 2005, 21:263-265.
- [32]Haploview[http://www.broadinstitute.org/haploview webcite]
- [33]VassarStats:Website for statistical computation[http://vassarstats.net webcite]