期刊论文详细信息
Clinical Epigenetics
DNA methylation of the IGF2/H19 imprinting control region and adiposity distribution in young adults
Jeffrey M Craig5  Leon A Adams3  Trevor A Mori2  JAM van Eekelen3  Craig E Pennell3  Xin Li1  Lawrence J Beilin2  Sally Burrows2  John C Galati1  Rae-Chi Huang4 
[1] Department of Mathematics and Statistics, La Trobe University, Melbourne, VIC, 3086, Australia;School of Medicine and Pharmacology, University of Western Australia (UWA), Perth, WA, Australia;Telethon Institute for Child Health Research, (UWA), Perth, WA, Australia;Medical Research Foundation Building, Level 4, Rear 50 Murray Street, Perth, WA, 6000, Australia;Early Life Epigenetics Group, MCRI and Department of Paediatrics, University of Melbourne, Royal Children’s Hospital, Melbourne, VIC, Australia
关键词: Head circumference;    Raine Study;    Insulin-like growth factor;    DNA methylation;    Fetal programming;    Childhood;   
Others  :  791225
DOI  :  10.1186/1868-7083-4-21
 received in 2012-08-27, accepted in 2012-10-24,  发布年份 2012
PDF
【 摘 要 】

Background

The insulin-like growth factor 2 (IGF2) and H19 imprinted genes control growth and body composition. Adverse in-utero environments have been associated with obesity-related diseases and linked with altered DNA methylation at the IGF2/H19 locus. Postnatally, methylation at the IGF2/H19 imprinting control region (ICR) has been linked with cerebellum weight. We aimed to investigate whether decreased IGF2/H19 ICR methylation is associated with decreased birth and childhood anthropometry and increased contemporaneous adiposity.

DNA methylation in peripheral blood (n = 315) at 17 years old was measured at 12 cytosine-phosphate-guanine sites (CpGs), analysed as Sequenom MassARRAY EpiTYPER units within the IGF2/H19 ICR. Birth size, childhood head circumference (HC) at six time-points and anthropometry at age 17 years were measured. DNA methylation was investigated for its association with anthropometry using linear regression.

Results

The principal component of IGF2/H19 ICR DNA methylation (representing mean methylation across all CpG units) positively correlated with skin fold thickness (at four CpG units) (P-values between 0.04 to 0.001) and subcutaneous adiposity (P = 0.023) at age 17, but not with weight, height, BMI, waist circumference or visceral adiposity. IGF2/H19 methylation did not associate with birth weight, length or HC, but CpG unit 13 to 14 methylation was negatively associated with HC between 1 and 10 years. β-coefficients of four out of five remaining CpG units also estimated lower methylation with increasing childhood HC.

Conclusions

As greater IGF2/H19 methylation was associated with greater subcutaneous fat measures, but not overall, visceral or central adiposity, we hypothesize that obesogenic pressures in youth result in excess fat being preferentially stored in peripheral fat depots via the IGF2/H19 domain. Secondly, as IGF2/H19 methylation was not associated with birth size but negatively with early childhood HC, we hypothesize that the HC may be a more sensitive marker of early life programming of the IGF axis and of fetal physiology than birth size. To verify this, investigations of the dynamics of IGF2/H19 methylation and expression from birth to adolescence are required.

【 授权许可】

   
2012 Huang et al.; licensee BioMed Central Ltd.

【 预 览 】
附件列表
Files Size Format View
20140705011543824.pdf 310KB PDF download
Figure 2. 31KB Image download
Figure 1. 20KB Image download
【 图 表 】

Figure 1.

Figure 2.

【 参考文献 】
  • [1]Werner H, Le Roith D: New concepts in regulation and function of the insulin-like growth factors: implications for understanding normal growth and neoplasia. Cell Mol Life Sci 2000, 57:932-942.
  • [2]Dechiara TM, Efstratiadis A, Robertson EJ: A growth-deficiency phenotype in heterozygous mice carrying an insulin-like growth factor-II gene disrupted by targeting. Nature 1990, 345:78-80.
  • [3]Baker J, Liu JP, Robertson EJ, Efstratiadis A: Role of insulin-like growth-factors in embryonic and postnatal-growth. Cell 1993, 75:73-82.
  • [4]Lui JC, Finkielstain GP, Barnes KM, Baron J: An imprinted gene network that controls mammalian somatic growth is down-regulated during postnatal growth deceleration in multiple organs. Am J Physiol Regul Integr Comp Physiol 2008, 295:R189-R196.
  • [5]Jones BK, Levorse J, Tilghmann SM: Deletion of a nuclease-sensitive region between the Igf2 and H19 genes leads to Igf2 misregulation and increased adiposity. Hum Mol Genet 2001, 10:807-814.
  • [6]Sandhu MJS, Gibson JM, Heald AH, Dunger DB, Wareham NJ: Low circulating IGF-II concentrations predict weight gain and obesity in humans. Diabetes 2003, 52:1403-1408.
  • [7]Gu DF, O'Dell SD, Chen XH, Miller GJ, Day IN: Evidence of multiple causal sites affecting weight in the IGF2-INS-TH region of human chromosome 11. Hum Genet 2002, 110:173-181.
  • [8]O'Dell SD, Bujac SR, Miller GJ, Day IN: Associations of IGF2 ApaI RFLP and INS VNTR class I allele size with obesity. Eur J Hum Genet 1999, 7:821-827.
  • [9]Gaunt TR, Cooper JA, Miller GJ, Day IN, O'Dell SD: Positive associations between single nucleotide polymorphisms in the IGF2 gene region and body mass index in adult males. Hum Mol Genet 2001, 10:1491-1501.
  • [10]Rankinen T, Zuberi A, Chagnon YC, Weisnagel SJ, Argyropoulos G, Walts B, Perusse L, Bouchard C: The human obesity gene map: The 2005 update. Obesity 2006, 14:529-644.
  • [11]Roth SM, Schrager MA, Metter EJ, Riechman SE, Fleg JL, Hurley BF, Ferrell RE: IGF2 genotype and obesity in men and women across the adult age span. Int J Obes 2002, 26:585-587.
  • [12]Schrager MA, Roth SM, Ferrell RE, Metter EJ, Russek-Cohen E, Lynch NA, Lindle RS, Hurley BF: Insulin-like growth factor-2 genotype, fat-free mass, and muscle performance across the adult life span. J Appl Physiol 2004, 97:2176-2183.
  • [13]Heude B, Ong KK, Luben R, Wareham NJ, Sandhu MS: Study of association between common variation in the insulin-like growth factor 2 gene and indices of obesity and body size in middle-aged men and women. J Clin Endocrinol Metab 2007, 92:2734-2738.
  • [14]Gong L, Pan YX, Chen H: Gestational low protein diet in the rat mediates Igf2 gene expression in male offspring via altered hepatic DNA methylation. Epigenetics 2010, 5:619-626.
  • [15]Heijmans BT, Tobi EW, Stein AD, Putter H, Blauw GJ, Susser ES, Slagboom PE, Lumey LH: Persistent epigenetic differences associated with prenatal exposure to famine in humans. Proc Natl Acad Sci U S A 2008, 105:17046-17049.
  • [16]Ollikainen M, Craig JM: Epigenetic discordance at imprinting control regions in twins. Epigenomics 2011, 3:295-306.
  • [17]Bell AC, Felsenfeld G: Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene. Nature 2000, 405:482-485.
  • [18]Ollikainen M, Smith KR, Joo EJ, Ng HK, Andronikos R, Novakovic B, Aziz NK, Carlin JB, Morley R, Saffery R, Craig JM: DNA methylation analysis of multiple tissues from newborn twins reveals both genetic and intrauterine components to variation in the human neonatal epigenome. Hum Mol Genet 2010, 19:4176-4188.
  • [19]Constancia M, Hemberger M, Hughes J, Dean W, Ferguson-Smith A, Fundele R, Stewart F, Kelsey G, Fowden A, Sibley C, Reik W: Placental-specific IGF-II is a major modulator of placental and fetal growth. Nature 2002, 417:945-948.
  • [20]Gicquel C, Rossignol S, Cabrol S, Houang M, Steunou V, Barbu V, Danton F, Thibaud N, Le Merrer M, Burglen L, Bertrand AM, Netchine I, Le Bouc Y: Epimutation of the telomeric imprinting center region on chromosome 11p15 in Silver-Russell syndrome. Nat Genet 2005, 37:1003-1007.
  • [21]Reik W, Walter J: Genomic imprinting: parental influence on the genome. Nat Rev Genet 2001, 2:21-32.
  • [22]Kannenberg K, Weber K, Binder C, Urban C, Kirschner HJ, Binder G: IGF2/H19 hypomethylation is tissue, cell, and CpG site dependent and not correlated with body asymmetry in adolescents with Silver-Russell syndrome. Clin Epigenet 2012, 4:15. BioMed Central Full Text
  • [23]Barker DJ, Hales CN, Fall CH, Osmond C, Phipps K, Clark PM: Type 2 (non-insulin-dependent) diabetes-mellitus, hypertension and hyperlipemia (syndrome-x) - relation to reduced fetal growth. Diabetologia 1993, 36:62-67.
  • [24]Lillycrop KA, Phillips ES, Jackson AA, Hanson MA, Burdge GC: Dietary protein restriction of pregnant rats induces and folic acid supplementation prevents epigenetic modification of hepatic gene expression in the offspring. J Nutr 2005, 135:1382-1386.
  • [25]Lillycrop KA, Slater-Jefferies JL, Hanson MA, Godfrey KM, Jackson AA, Burdge GC: Induction of altered epigenetic regulation of the hepatic glucocorticoid receptor in the offspring of rats fed a protein-restricted diet during pregnancy suggests that reduced DNA methyltransferase-1 expression is involved in impaired DNA methylation and changes in histone modifications. Br J Nutr 2007, 97:1064-1073.
  • [26]Ravelli AC, van der Meulen JH, Osmond C, Barker DJ, Bleker OP: Obesity at the age of 50 y in men and women exposed to famine prenatally. Am J Clin Nutr 1999, 70:811-816.
  • [27]Stein AD, Kahn HS, Rundle A, Zybert PA, Bruin K, Lumey LH: Anthropometric measures in middle age after exposure to famine during gestation: evidence from the Dutch famine. Am J Clin Nutr 2007, 85:869-876.
  • [28]Steegers-Theunissen RP, Obermann-Borst SA, Kremer D, Lindemans J, Siebel C, Steegers EA, Slagboom PE, Heijmans BT: Periconceptional maternal folic acid use of 400 mu g per day is related to increased methylation of the igf2 gene in the very young child. PLoS One 2009, 4:5.
  • [29]Hoyo C, Murtha AP, Schildkraut JM, Jirtle R, Demark-Wahnefried W, Forman MR, Iversen ES, Kurtzberg J, Overcash F, Huang Z, Murphy SK: Methylation variation at IGF2 differentially methylated regions and maternal folic acid use before and during pregnancy. Epigenetics 2011, 6:928-936.
  • [30]Perkins E, Murphy SK, Murtha AP, Schildkraut J, Jirtle RL, Demark-Wahnefried W, Forman MR, Kurtzberg J, Overcash F, Huang Z, Hoyo C: Insulin-like growth factor 2/H19 methylation at birth and risk of overweight and obesity in children. J Pediatr 2012, 161:31-39.
  • [31]Zimmet P, George K, Alberti MM, Kaufman F, Tajima N, Silink M, Arslanian S, Wong G, Bennett P, Shaw J, Caprio S, IDF Consensus Group: The metabolic syndrome in children and adolescents - an IDF consensus report. Pediatr Diabetes 2007, 8:299-306.
  • [32]Yoshikawa K, Okada T, Munakata S, Okahashi A, Yonezawa R, Makimoto M, Hosono S, Takahashi S, Mugishima H, Yamamoto T: Association between serum lipoprotein lipase mass concentration and subcutaneous fat accumulation during neonatal period. Eur J Clin Nutr 2010, 64:447-453.
  • [33]Kunitomi M, Wada J, Takahashi K, Tsuchiyama Y, Mimura Y, Hida K, Miyatake N, Fujii M, Kira S, Shikata K, Maknio H: Relationship between reduced serum IGF-I levels and accumulation of visceral fat in Japanese men. Int J Obes 2002, 26:361-369.
  • [34]Falkert A, Dittmann K, Seelbach-Gobel B: Silver-Russell syndrome as a cause for early intrauterine growth restriction. Prenat Diagn 2005, 25:497-501.
  • [35]Rice T, Chagnon YC, Perusse L, Borecki IB, Ukkola O, Rankinen T, Gagnon J, Leon AS, Skinner JS, Wilmore JH, Bouchard C, Rao DC: A genomewide linkage scan for abdominal subcutaneous and visceral fat in black and white families: the HERITAGE Family Study. Diabetes 2002, 51:848-855.
  • [36]Perusse L, Rice T, Chagnon YC, Despres JP, Lemieux S, Roy S, Lacaille M, Ho-Kim MA, Chagnon M, Province MA, Rao DC, Bouchard C: A genome-wide scan for abdominal fat assessed by computed tomography in the Quebec Family Study. Diabetes 2001, 50:614-621.
  • [37]Rasmussen MH, Frystyk J, Andersen T, Breum L, Christiansen JS, Hilsted J: The impact of obesity, fat distribution, and energy restriction on insulin-like growth-factor-I (Igf-1), Igf-binding protein-3, insulin, and growth-hormone. Metab Clin Exp 1994, 43:315-319.
  • [38]Schoen RE, Schragin J, Weissfeld JL, Thaete FL, Evans RW, Rosen CJ, Kuller LH: Lack of association between adipose tissue distribution and IGF-1 and IGFBP-3 in men and women. Cancer Epidemiol Biomarkers Prev 2002, 11:581-586.
  • [39]Romero-Corral A, Montori VM, Somers VK, Korinek J, Thomas RJ, Allison TG, Mookadam F, Lopez-Jimenez F: Association of bodyweight with total mortality and with cardiovascular events in coronary artery disease: a systematic review of cohort studies. Lancet 2006, 368:666-678.
  • [40]Musaro A, McCullagh K, Paul A, Houghton L, Dobrowolny G, Molinaro M, Barton ER, Sweeney HL, Rosenthal N: Localized Igf-1 transgene expression sustains hypertrophy and regeneration in senescent skeletal muscle. Nat Genet 2001, 27:195-200.
  • [41]McLaughlin T, Lamendola C, Liu A, Abbasi F: Preferential fat deposition in subcutaneous versus visceral depots is associated with insulin sensitivity. J Clin Endocrinol Metab 2011, 96:E1756-E1760.
  • [42]Porter SA, Massaro JM, Hoffmann U, Vasan RS, O'Donnel CJ, Fox CS: Abdominal subcutaneous adipose tissue: a protective fat depot? Diabetes Care 2009, 32:1068-1075.
  • [43]Wajchenberg BL: Subcutaneous and visceral adipose tissue: their relation to the metabolic syndrome. Endocr Rev 2000, 21:697-738.
  • [44]Harding JE, Johnston BM: Nutrition and fetal growth. Reprod Fertil Dev 1995, 7:539-547.
  • [45]Rattanatray L, MacLaughlin SM, Kleemann DO, Walker SK, Muhlhausler BS, McMillen IC: Impact of maternal periconceptional overnutrition on fat mass and expression of adipogenic and lipogenic genes in visceral and subcutaneous fat depots in the postnatal lamb. Endocrinology 2010, 151:5195-5205.
  • [46]Lumey LH, Stein AD, Ravelli AC: Timing of prenatal starvation in women and offspring birth weight: An update. Eur J Obstet Gynecol Reprod Biol 1995, 63:197-197.
  • [47]Reik W, Dean W, Walter J: Epigenetic reprogramming in mammalian development. Science 2001, 293:1089-1093.
  • [48]Doherty AS, Mann MR, Tremblay KD, Bartolomei MS, Schultz RM: Differential effects of culture on imprinted H19 expression in the preimplantation mouse embryo. Biol Reprod 2000, 62:1526-1535.
  • [49]Tobi EW, Heijmans BT, Kremer D, Putter H, de Delemarre-van Waal HA, Finken MJ, Wit JM, Slagboom PE: DNA methylation of IGF2, GNASAS, INSIGF and LEP and being born small for gestational age. Epigenetics 2011, 6:171-176.
  • [50]Diplas AI, Lambertini L, Lee MJ, Sperling R, Lee YL, Wetmur J, Chen J: Differential expression of imprinted genes in normal and IUGR human placentas. Epigenetics 2009, 4:235-240.
  • [51]Gordon L, Joo JE, Powell JE, Ollikainen M, Novakovic B, Li X, Andronikos R, Cruickshank MN, Conneely KN, Smith AK, Alisch RS, Morley R, Visscher PM, Craig JM, Saffery R: Neonatal DNA methylation profile in human twins is specified by a complex interplay between intrauterine environmental and genetic factors, subject to tissue-specific influence. Genome Res 2012, 22:1395-1406.
  • [52]Laron Z, Anin S, Klipperaurbach Y, Klinger B: Effects of insulin-like growth-factor on linear growth, head circumference, and body-fat in patients with laron-type dwarfism. Lancet 1992, 339:1258-1261.
  • [53]Pidsley R, Dempster EL, Mill J: Brain weight in males is correlated with DNA methylation at IGF2. Mol Psychiatr 2010, 15:880-881.
  • [54]Pidsley R, Dempster E, Troakes C, Al-Sarraj S, Mill J: Epigenetic and genetic variation at the IGF2/H19 imprinting control region on 11p15.5 is associated with cerebellum weight. Epigenetics 2012, 7:155-163.
  • [55]Timmermans S, Jaddoe VW, Hofman A, Steegers-Theunissen RP, Steegers EA: Periconception folic acid supplementation, fetal growth and the risks of low birth weight and preterm birth: the Generation R Study. Br J Nutr 2009, 102:777-785.
  • [56]Mook-Kanamori DO, Marsh JA, Warrington NM, Taal HR, Newnham JP, Beilin LJ, Lye SJ, Palmer LJ, Hofman A, Steegers EA, Pennell CE, Early Growth Genetics C, Jaddoe VW: Variants near CCNL1/LEKR1 and in ADCY5 and fetal growth characteristics in different trimesters. J Clin Endocrinol Metab 2011, 96:E810-E815.
  • [57]Hanson MA, Godfrey KM: Commentary: Maternal constraint is a pre-eminent regulator of fetal growth. Int J Epidemiol 2008, 37:252-254.
  • [58]Albrecht S, Waha A, Koch A, Kraus JA, Goodyer CG, Pietsch T: Variable imprinting of H19 and IGF2 in fetal cerebellum and medulloblastoma. J Neuropathol Exp Neurol 1996, 55:1270-1276.
  • [59]Heijmans BT, Kremer D, Tobi EW, Boomsma DI, Slagboom PE: Heritable rather than age-related environmental and stochastic factors dominate variation in DNA methylation of the human IGF2/H19 locus. Hum Mol Genet 2007, 16:547-554.
  • [60]Murphy SK, Huang Z, Hoyo C: Differentially methylated regions of imprinted genes in prenatal, perinatal and postnatal human tissues. PLoS One 2012, 7:7.
  • [61]Cruz-Correa M, Zhao R, Oviedo M, Bernabe RD, Lacourt M, Cardona A, Lopez-Enriquez R, Wexner S, Cuffari C, Hylind L, Platz E, Cui H, Feinberg AP, Giardiello FM: Temporal stability and age-related prevalence of loss of imprinting of the insulin-like growth factor-2 gene. Epigenetics 2009, 4:114-118.
  • [62]Sandovici I, Leppert M, Hawk PR, Suarez A, Linares Y, Sapienza C: Familial aggregation of abnormal methylation of parental alleles at the IGF2/H19 and IGF2R differentially methylated regions. Hum Mol Genet 2003, 12:1569-1578.
  • [63]Murrell A, Heeson S, Cooper WN, Douglas E, Apostolidou S, Moore GE, Maher ER, Reik W: An association between variants in the IGF2 gene and Beckwith-Wiedemann syndrome: interaction between genotype and epigenotype. Hum Mol Genet 2004, 13:247-255.
  • [64]Wang X, Zhu H, Snieder H, Su S, Munn D, Harshfield G, Maria BL, Dong YB, Treiber F, Gutin B, Shi H: Obesity related methylation changes in DNA of peripheral blood leukocytes. BMC Med 2010, 8:1-8. article 87 BioMed Central Full Text
  • [65]Shoemaker R, Deng J, Wang W, Zhang K: Allele-specific methylation is prevalent and is contributed by CpG-SNPs in the human genome. Genome Res 2010, 20:883-889.
  • [66]Rakyan VK, Down TA, Balding DJ, Beck S: Epigenome-wide association studies for common human diseases. Nat Rev Genet 2011, 12:529-541.
  • [67]Huang RC, Mori TA, Burke V, Newnham J, Stanley FJ, Landau LI, Kendall GE, Oddy WH, Beilin LJ: Synergy between adiposity, insulin resistance, metabolic risk factors, and inflammation in adolescents. Diabetes Care 2009, 32:695-701.
  • [68]Kim SK, Kim HJ, Hur KY, Choi SH, Ahn CW, Lim SK, Kim KR, Lee HC, Huh KB, Cha BS: Visceral fat thickness measured by-ultrasonography can estimate not only visceral obesity but also risks of cardiovascular and metabolic diseases. Am J Clin Nutr 2004, 79:593-599.
  • [69]Ehrich M, Nelson MR, Stanssens P, Zabeau M, Liloglou T, Xinarianos G, Cantor CR, Field JK, van den Boom D: Quantitative high-throughput analysis of DNA methylation patterns by base-specific cleavage and mass spectrometry. Proc Natl Acad Sci U S A 2005, 102:15785-15790.
  • [70]Benjamini Y, Hochberg Y: Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Statist Soc B 1995, 57:289-300.
  文献评价指标  
  下载次数:2次 浏览次数:12次