期刊论文详细信息
BMC Medical Genetics
Spectrum of phenotypic anomalies in four families with deletion of the SHOX enhancer region
Liborio Stuppia1  Angelika Mohn3  Francesco Chiarelli3  Antonio Raffaele Cotroneo2  Massimo Savastano2  Giovanni Cannataro2  Sara Franchi1  Valentina Chiavaroli3  Chiara Palka3  Valentina Gatta1 
[1] Center of Excellence on Aging, “G. d’Annunzio” University Foundation, via dei Vestini 31, 66013 Chieti, Italy;Department of Neuroscience and Imaging, Section of Diagnostic Imaging and Therapy, Radiology Division, “G. d’Annunzio” University of Chieti, Chieti, Italy;Department of Paediatrics, “G. d’Annunzio” University of Chieti, via dei Vestini 5, 66013 Chieti, Italy
关键词: Short stature;    SHOX;    MLPA;    Madelung deformity;   
Others  :  1091102
DOI  :  10.1186/1471-2350-15-87
 received in 2014-03-31, accepted in 2014-07-08,  发布年份 2014
PDF
【 摘 要 】

Background

SHOX alterations have been reported in 67% of patients affected by Léri-Weill dyschondrosteosis (LWD), with a larger prevalence of gene deletions than point mutations. It has been recently demonstrated that these deletions can involve the SHOX enhancer region, rather that the coding region, with variable phenotype of the affected patients.

Here, we report a SHOX gene analysis carried out by MLPA in 14 LWD patients from 4 families with variable phenotype.

Case presentation

All patients presented a SHOX enhancer deletion. In particular, a patient with a severe bilateral Madelung deformity without short stature showed a homozygous alteration identical to the recently described 47.5 kb PAR1 deletion. Moreover, we identified, for the first time, in three related patients with a severe bilateral Madelung deformity, a smaller deletion than the 47.5 kb PAR1 deletion encompassing the same enhancer region (ECR1/CNE7).

Conclusions

Data reported in this study provide new information about the spectrum of phenotypic alterations showed by LWD patients with different deletions of the SHOX enhancer region.

【 授权许可】

   
2014 Gatta et al.; licensee BioMed Central Ltd.

【 预 览 】
附件列表
Files Size Format View
20150128165628215.pdf 2187KB PDF download
Figure 2. 124KB Image download
Figure 1. 50KB Image download
【 图 表 】

Figure 1.

Figure 2.

【 参考文献 】
  • [1]Ellison JW, Wardak Z, Young MF, Robey PG, Laig-Webster M, Chiong W: PHOG, a candidate gene for involvement in the short stature of Turner syndrome. Hum Mol Genet 1997, 6:1341-1347.
  • [2]Belin V, Cusin V, Viot G, Girlich D, Toutain A, Moncla A, Vekemans M, Le Merrer M, Munnich A, Cormier-Daire V: SHOX mutations in dyschondrosteosis (Léri-Weill syndrome). Nat Genet 1998, 19:67-69.
  • [3]Stuppia L, Calabrese G, Borrelli P, Gatta V, Morizio E, Mingarelli R, Di Gilio MC, Crinò A, Giannotti A, Rappold GA, Palka G: Loss of the SHOX gene associated with Léri-Weill dyschondrosteosis in a 45, X male. J Med Genet 1999, 36:711-713.
  • [4]Calabrese G, Fischetto R, Stuppia L, Capodiferro F, Mingarelli R, Causio F, Rocchi M, Rappold GA, Palka G: X/Y translocation in a family with Léri-Weill dyschondrosteosis. Hum Genet 1999, 105:367-368.
  • [5]Palka G, Stuppia L, Guanciali Franchi P, Chiarelli F, Fischetto R, Borrelli P, Giannotti A, Fioretti G, Rinaldi MM, Mingarelli R, Rappold GA, Calabrese G: Short arm rearrangements of sex chromosomes with haploinsufficiency of the SHOX gene are associated with Léri-Weill dyschondrosteosis. Clin Genet 2000, 57:449-453.
  • [6]Rappold GA, Fukami M, Niesler B, Schiller S, Zumkeller W, Bettendorf M, Heinrich U, Vlachopapadoupoulou E, Reinehr T, Onigata K, Ogata T: Deletions of the homeobox gene SHOX (short stature homeobox) are an important cause of growth failure in children with short stature. J Clin Endocrinol Metab 2002, 87:1402-1406.
  • [7]Chen J, Wildhardt G, Zhong Z, Röth R, Weiss B, Steinberger D, Decker J, Blum WF, Rappold G: Enhancer deletions of the SHOX gene as a frequent cause of short stature: the essential role of a 250 kb downstream regulatory region. J Med Genet 2009, 46:834-839.
  • [8]Sabherwal N, Bangs F, Röth R, Weiss B, Jantz K, Tiecke E, Hinkel GK, Spaich C, Hauffa BP, van der Kamp H, Kapeller J, Tickle C, Rappold G: Longrange conserved non-coding SHOX sequences regulate expression in developing chicken limb and are associated with short stature phenotypes in human patients. Hum Mol Genet 2007, 16:210-222.
  • [9]Morizio E, Stuppia L, Gatta V, Fantasia D, Guanciali Franchi P, Rinaldi MM, Scarano G, Concolino D, Giannotti A, Verrotti A, Chiarelli F, Calabrese G, Palka G: Deletion of the SHOX gene in patients with short stature of unknown cause. Am J Med Genet A 2003, 119A:293-296.
  • [10]Stuppia L, Calabrese G, Gatta V, Pintor S, Morizio E, Fantasia D, Guanciali Franchi P, Rinaldi MM, Scarano G, Concolino D, Giannotti A, Petreschi F, Anzellotti MT, Pomilio M, Chiarelli F, Tumini S, Palka G: SHOX mutations detected by FISH and direct sequencing in patients with short stature. J Med Genet 2003, 40:E11.
  • [11]Ross JL, Scott C Jr, Marttila P, Kowal K, Nass A, Papenhausen P, Abboudi J, Osterman L, Kushner H, Carter P, Ezaki M, Elder F, Wei F, Chen H, Zinn AR: Phenotypes associated with SHOX deficiency. J Clin Endocrinol Metab 2001, 86:5674-5680.
  • [12]Jorge AA, Souza SC, Nishi MY, Billerbeck AE, Libório DC, Kim CA, Arnhold IJ, Mendonca BB: SHOX mutations in idiopathic short stature and Léri-Weill dyschondrosteosis: frequency and phenotypic variability. Clin Endocrinol (Oxf) 2007, 66:130-135.
  • [13]Binder G, Ranke MB, Martin DD: Auxology is a valuable instrument for the clinical diagnosis of SHOX haploinsufficiency in schoolage children with unexplained short stature. J Clin Endocrinol Metab 2003, 88:4891-4896.
  • [14]Niesler B, Röth R, Wilke S, Fujimura F, Fischer C, Rappold G: The novel human SHOX allelic variant database. Hum Mutat 2007, 28:933-938.
  • [15]Binder G, Weidenkeller M, Blumenstock G, Langkamp M, Weber K, Franz AR: Rational approach to the diagnosis of severe growth hormone deficiency in the newborn. J Clin Endocrinol Metab 2010, 95:2219-2226.
  • [16]Rappold G, Blum WF, Shavrikova EP, Crowe BJ, Roeth R, Quigley CA, Ross JL, Niesler B: Genotypes and phenotypes in children with short stature: clinical indicators of SHOX haploinsufficiency. J Med Genet 2007, 44:306-313.
  • [17]Binder G: Short stature due to SHOX deficiency: genotype, phenotype, and therapy. Horm Res Paediatr 2011, 75:81-89.
  • [18]Gatta V, Antonucci I, Morizio E, Palka C, Fischetto R, Mokini V, Tumini S, Calabrese G, Stuppia L: Identification and characterization of different SHOX gene deletions in patients with Léri-Weill dyschondrosteosys by MLPA assay. J Hum Genet 2007, 52:21-27.
  • [19]Stuppia L, Gatta V, Antonucci I, Giuliani R, Palka G: Different approaches in the molecular analysis of the SHOX gene dysfunctions. J Endocrinol Invest 2010, 33:30-33.
  • [20]Huber C, Rosilio M, Munnich A, Cormier- Daire V: French SHOX GeNeSIS Module: High incidence of SHOX anomalies in individuals with short stature. J Med Genet 2006, 43:735-739.
  • [21]Stuppia L, Antonucci I, Palka G, Gatta V: Use of the MLPA Assay in the molecular diagnosis of gene copy number alterations in human genetic diseases. Int J Mol Sci 2012, 13:3245-3276.
  • [22]Fukami M, Kato F, Tajima T, Yokoya S, Ogata T: Transactivation function of an approximately 800-bp evolutionarily conserved sequence at the SHOX 3' region: implication for the downstream enhancer. Am J Hum Genet 2006, 78:167-170.
  • [23]Fukami M, Dateki S, Kato F, Hasegawa Y, Mochizuki H, Horikawa R, Ogata T: Identification and characterization of cryptic SHOX intragenic deletions in three Japanese patients with Léri-Weill dyschondrosteosis. J Hum Genet 2008, 53:454-459.
  • [24]Durand C, Bangs F, Signolet J, Decker E, Tickle C, Rappold G: Enhancer elements upstream of the SHOX gene are active in the developing limb. Eur J Hum Genet 2010, 18:527-532.
  • [25]Kenyon EJ, McEwen G, Callaway H, Elgar G: Functional analysis of conserved noncoding regions around the short Stature hox Gene (shox) in whole zebrafish embryos. PLoS One 2011, 6:e21498.
  • [26]Benito-Sanz S, Royo JL, Barroso E, Paumard-Hernández B, Barreda-Bonis AC, Liu P, Gracía R, Lupski JR, Campos-Barros Á, Gómez-Skarmeta JL, Heath KE: Identification of the first recurrent PAR1 deletion in Léri-Weill dyschondrosteosis and idiopathic short stature reveals the presence of a novel SHOX enhancer. J Med Genet 2012, 49:442-450.
  • [27]Caliebe J, Broekman S, Boogaard M, Bosch CA, Ruivenkamp CA, Oostdijk W, Kant SG, Binder G, Ranke MB, Wit JM, Losekoot M: IGF1, IGF1R and SHOX mutation analysis in short children born small for gestational age and short children with normal birth size (idiopathic short stature). Horm Res Paediatr 2012, 77:250-260.
  • [28]Kant SG, Broekman SJ, de Wit CC, Bos M, Bos M, Scheltinga SA, Bakker E, Oostdijk W, van der Kamp HJ, van Zwet EW, van der Hout AH, Wit JM, Losekoot M: Phenotypic characterization of patients with deletions in the 3'-flanking SHOX region. Peer J 2013, 19:1:e.
  • [29]Schiller S, Spranger S, Schechinger B, Fukami M, Merker S, Drop SL, Tröger J, Knoblauch H, Kunze J, Seidel J, Rappold GA: Phenotypic variation and genetic heterogeneity in Léri–Weill syndrome. Eur J Hum Genet 2000, 8:54-62.
  • [30]Marchini A, Marttila T, Winter A, Caldeira S, Malanchi I, Blaschke RJ, Häcker B, Rao E, Karperien M, Wit JM, Richter W, Tommasino M, Rappold GA: The short stature homeodomain protein SHOX induces cellular growth arrest and apoptosis and is expressed in human growth plate chondrocytes. J Biol Chem 2004, 279:37103-37114.
  • [31]Munns CJ, Haase HR, Crowther LM, Hayes MT, Blaschke R, Rappold G, Glass IA, Batch JA: Expression of SHOX in human fetal and childhood growth plate. J Clin Endocrinol Metab 2004, 89:4130-4135.
  • [32]Munns CF, Glass IA, LaBrom R, Hayes M, Flanagan S, Berry M, Hyland VJ, Batch JA, Philips GE, Vickers D: Histopathological analysis of Léri-Weill dyschondrosteosis: disordered growth plate. Hand Surg 2001, 6:13-23.
  • [33]Ogata T: SHOX: pseudoautosomal homeobox containing gene for short stature and dyschondrosteosis. Growth Horm IGF Res 1999, 9(Suppl B):53-57.
  文献评价指标  
  下载次数:24次 浏览次数:15次