期刊论文详细信息
BMC Genetics
A fifth major genetic group among honeybees revealed in Syria
Lionel Garnery3  Walter Steven Sheppard2  Ali Alburaki1  Sibyle Moulin4  Hélène Legout4  Bénédicte Bertrand4  Mohamed Alburaki5 
[1] University of Damascus, Faculty of Agriculture, PO BOX: 30621, Damascus, Syria;Department of Entomology, Washington State University, Pollman, WA 99164-6382, USA;Université de Versailles Saint-Quentin, Versailles, France;CNRS, Laboratoire Evolution, Génomes et Spéciation LEGS, Avenue de la Terrasse, 91189 Gif-sur-Yvette, France;Université Laval, Institut de Biologie Intégrative et des Systèmes (IBIS), Pavillon Charles-Eugène Marchand, 1030, Avenue de la Médecine, Québec, QC G1V 0A6, Canada
关键词: Population genetics;    Conservation genetics;    Microsatellite;    Apis mellifera syriaca;   
Others  :  1086162
DOI  :  10.1186/1471-2156-14-117
 received in 2013-07-13, accepted in 2013-11-29,  发布年份 2013
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【 摘 要 】

Background

Apiculture has been practiced in North Africa and the Middle-East from antiquity. Several thousand years of selective breeding have left a mosaic of Apis mellifera subspecies in the Middle-East, many uniquely adapted and survived to local environmental conditions. In this study we explore the genetic diversity of A. mellifera from Syria (n = 1258), Lebanon (n = 169) and Iraq (n = 35) based on 14 short tandem repeat (STR) loci in the context of reference populations from throughout the Old World (n = 732).

Results

Our data suggest that the Syrian honeybee Apis mellifera syriaca occurs in both Syrian and Lebanese territories, with no significant genetic variability between respective populations from Syria and Lebanon. All studied populations clustered within a new fifth independent nuclear cluster, congruent with an mtDNA Z haplotype identified in a previous study. Syrian honeybee populations are not associated with Oriental lineage O, except for sporadic introgression into some populations close to the Turkish and Iraqi borders. Southern Syrian and Lebanese populations demonstrated high levels of genetic diversity compared to the northern populations.

Conclusion

This study revealed the effects of foreign queen importations on Syrian bee populations, especially for the region of Tartus, where extensive introgression of A. m. anatolica and/or A. m. caucasica alleles were identified. The policy of creating genetic conservation centers for the Syrian subspecies should take into consideration the influence of the oriental lineage O from the northern Syrian border and the large population of genetically divergent indigenous honeybees located in southern Syria.

【 授权许可】

   
2013 Alburaki et al.; licensee BioMed Central Ltd.

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【 参考文献 】
  • [1]Ruttner F: Biogeography and taxonomy of honeybees. Berlin: Springer-Verlag; 1988.
  • [2]Ruttner F, Tassencourt L, Louveaux J: Biometrical-statistical analysis of the geographic variability of Apis mellifera. Apidologie 1978, 9:363-381.
  • [3]Garnery L, Solignac M, Celebrano G, Cornuet JM: A simple test using restricted pcr-amplified mitochondrial-DNA to study the genetic-structure of Apis mellifera L. Experientia 1993, 49(11):1016-1021.
  • [4]Garnery L, Mosshine EH, Oldroyd BP, Cornuet JM: Mitochondrial DNA variation in Moroccan and Spanish honeybee populations. Mol Ecol 1995, 4:465-472.
  • [5]Sheppard WS, Rinderer TE, Garnery L, Shimanuki H: Analysis of Africanized honeybee mitochondrial DNA reveals further diversity of origin. Genet Mol Biol 1999, 22(1):73-75.
  • [6]Whitfield CW, Behura SK, Berlocher SH, Clark AG, Johnston JS, Sheppard WS, Smith DR, Suarez AV, Weaver D, Tsutsui ND: Thrice out of Africa: ancient and recent expansions of the honeybee. Apis mellifera. Science 2006, 314(5799):642-645.
  • [7]Han F, Wallberg A, Webster MT: From where did the Western honeybee (Apis mellifera) originate? Ecology and evolution 2012, 2(8):1949-1957.
  • [8]Franck P, Garnery L, Solignac M, Cornuet J-M: Molecular confirmation of a fourth lineage in honeybees from the Near East. Apidologie 2000, 31(2):167-180.
  • [9]Garnery L, Franck P, Baudry E, Vautrin D, Cornuet JM, Solignac M: Genetic biodiversity of the west European honeybee (Apis mellifera and A. m. iberica) I: mitochondrial DNA. Evolution 1998, 30(1):31-47.
  • [10]De la Rua P, Galian J, Serrano J, Moritz RFA: Molecular characterization and population structure of the honeybees from the Balearic islands (Spain). Apidologie 2001, 32(5):417-427.
  • [11]Alburaki M, Moulin S, Legout H, Alburaki A, Garnery L: Mitochondrial structure of Eastern honeybee populations from Syria, Lebanon and Iraq. Apidologie 2011, 42(5):628-641.
  • [12]Ftayeh A, Meixner M, Fuchs S: Morphometrical investigation in Syrian honeybees. Apidologie 1994, 25(4):396-401.
  • [13]Smith DR, Palopoli MF, Taylor BR, Garnery L, Cornuet JM, Solignac M, Brown WM: Geographical overlap of two mitochondrial genomes in Spanish honeybees (Apis mellifera iberica). The Journal of heredity 1991, 82(2):96-100.
  • [14]Arias MC, Sheppard WS: Molecular phylogenetics of honeybee subspecies (Apis mellifera L.) inferred from mitochondrial DNA sequence. Mol Phylogenet Evol 1996, 5(3):557-566.
  • [15]De la Rua P, Serrano J, Galian J: Mitochondrial DNA variability in the Canary Islands honeybees (Apis mellifera L.). Molecular ecology 1998, 7(11):1543-1547.
  • [16]Kandemir I, Pinto MA, Meixner MD, Sheppard WS: Hinf-I digestion of cytochrome oxidase I region is not a diagnostic test for A. m. lamarckii. Genet Mol Biol 2006, 29(4):747-749.
  • [17]Evanno G, Regnaut S, Goudet J: Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Molecular ecology 2005, 14(8):2611-2620.
  • [18]Cavalli-Sforza LL, Edwards SV: Phylogenetic analysis: models and estimation procedures. Evolution 1967, 21(3):550-570.
  • [19]Garnery L, Franck P, Baudry E, Vautrin D, Cornuet JM, Solignac M: Genetic diversity of the west European honeybee (Apis mellifera mellifera and A. m. iberica). II. Microsatellite loci. Genet Sel Evol 1998, 30:S49-S74. BioMed Central Full Text
  • [20]Perrier C, Strange J, Langella O, Shappard SW, Garnery L: Diversité génétique, introgressions mitocondriales et nucléaires dans une population d’abeilles des Landes de Gascogne. Actes Bureau Ressources Génétiques 2003, 4:79-100.
  • [21]Franck P, Garnery L, Solignac M, Cornuet JM: The origin of west European subspecies of honeybees (Apis mellifera): new insights from microsatellite and mitochondrial data. Evolution 1998, 52(4):1119-1134.
  • [22]Solignac M, Vautrin D, Baudry E, Mougel F, Loiseau A, Cornuet J-M: A microsatellite-based linkage map of the honeybee, Apis mellifera L. Genetics Soc America 2004, 167:253-262.
  • [23]Franck P, Garnery L, Loiseau A, Oldroyd BP, Hepburn HR, Solignac M, Cornuet JM: Genetic diversity of the honeybee in Africa: microsatellite and mitochondrial data. Heredity 2001, 86:420-430.
  • [24]Miguel I, Baylac M, Iriondo M, Manzano C, Garnery L, Estonba A: Both geometric morphometric and microsatellite data consistently support the differentiation of the Apis mellifera M evolutionary branch. Apidologie 2011, 42(2):150-161.
  • [25]Strange JP, Garnery L, Sheppard WS: Morphological and molecular characterization of the Landes honeybee (Apis mellifera L.) ecotype for genetic conservation. J Insect Conserv 2008, 12(5):527-537.
  • [26]De la Rua P, Galian J, Serrano J, Moritz RFA: Genetic structure of Balearic honeybee populations based on microsatellite polymorphism. Genet Sel Evol 2003, 35(3):339-350. BioMed Central Full Text
  • [27]De la Rua P, Jimenez Y, Galian J, Serrano J: Evaluation of the biodiversity of honeybee (Apis mellifera) populations from eastern Spain. J Apicult Res 2004, 43(4):162-166.
  • [28]Canovas F, de la Rua P, Serrano J, Galian J: Microsatellite variability reveals beekeeping influences on Iberian honeybee populations. Apidologie 2011, 42(3):235-251.
  • [29]Miguel I, Iriondo M, Garnery L, Sheppard WS, Estonba A: Gene flow within the M evolutionary lineage of Apis mellifera: role of the Pyrenees, isolation by distance and post-glacial re-colonization routes in the western Europe. Apidologie 2007, 38(2):141-155.
  • [30]Walsh PS, Metzger DA, Higuchi R: Chelex 100 as a medium for simple extraction of DNA for PCR-based typing from forensic material. Biotechniques 1991, 10(4):506-513.
  • [31]Estoup A, Garnery L, Solignac M, Cornuet JM: Microsatellite variation in honeybee (Apis mellifera L.) populations - hierarchical genetic-structure and test of the infinite Allele and stepwise mutation models. Genetics 1995, 140(2):679-695.
  • [32]Solignac M, Vautrin D, Loiseau A, Mougel F, Baudry E, Estoup A, Garnery L, Haberl M, Cornuet JM: Five hundred and fifty microsatellite markers for the study of the honeybee (Apis mellifera L.) genome. Mol Ecol Notes 2003, 3(2):307-311.
  • [33]Muñoz I, Dall’Olio R, Lodesani M, De la Rúa P: Population genetic structure of coastal Croatian honeybees (Apis mellifera carnica). Apidologie 2009, 40(6):617-626.
  • [34]Consortium: Insights into social insects from the genome of the honeybee Apis mellifera. Nature 2006, 443(7114):931-949.
  • [35]Pritchard JK, Stephens M, Donnelly P: Inference of population structure using multilocus genotype data. Genetics 2000, 155(2):945-959.
  • [36]Jombart T, Devillard S, Balloux F: Discriminant analysis of principal components: a new method for the analysis of genetically structured populations. BMC Genet 2010, 11:94.
  • [37]Excoffier L, Laval G, Schneider S: Arlequin (version 3.0): an integrated software package for population genetics data analysis. Evol Bioinform 2005, 1:47-50.
  • [38]Hedges SB: The number of replications needed for accurate estimation of the bootstrap P value in phylogenetic studies. Mol Biol Evol 1992, 9(2):366-369.
  • [39]Raymond M, Rousset F: Genepop (Version-1.2) - Population-genetics software for exact tests and ecumenicism. J Hered 1995, 86(3):248-249.
  • [40]Chakraborty R, Jin L: A unified approach to study hypervariable polymorphisms: statistical considerations of determining relatedness and population distances. Exs 1993, 67:153-175.
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