BMC Molecular Biology | |
TRPC1 transcript variants, inefficient nonsense-mediated decay and low up-frameshift-1 in vascular smooth muscle cells | |
David J Beech1  Karen E Porter2  Hans-Martin Jäck4  Jürgen Wittmann4  Alan N Bateson1  Christopher Munsch3  Bhaskar Kumar1  Fanning Zeng1  Sarka Tumova1  Yasser Majeed1  Alexandra M Dedman1  | |
[1] Institute of Membrane & Systems Biology, Faculty of Biological Sciences, Mount Preston Street, University of Leeds, Leeds, LS2 9JT, UK;Faculty of Medicine & Health, Clarendon Way, University of Leeds, Leeds, LS2 9JT, UK;Yorkshire Heart Centre, General Infirmary at Leeds, Great George Street, Leeds, LS1 3EX, UK;Division of Molecular Immunology, Nikolaus Fiebiger-Center for Molecular Medicine, University of Erlangen-Nürnberg, Glueckstrasse 6, D-91054 Erlangen, Germany | |
关键词: transient receptor potential canonical 1; cationic channel; nonsense-mediated decay; alternative splicing; | |
Others : 1129278 DOI : 10.1186/1471-2199-12-30 |
|
received in 2011-04-06, accepted in 2011-07-12, 发布年份 2011 | |
【 摘 要 】
Background
Transient Receptor Potential Canonical 1 (TRPC1) is a widely-expressed mammalian cationic channel with functional effects that include stimulation of cardiovascular remodelling. The initial aim of this study was to investigate variation in TRPC1-encoding gene transcripts.
Results
Extensive TRPC1 transcript alternative splicing was observed, with exons 2, 3 and 5-9 frequently omitted, leading to variants containing premature termination codons. Consistent with the predicted sensitivity of such variants to nonsense-mediated decay (NMD) the variants were increased by cycloheximide. However it was notable that control of the variants by NMD was prominent in human embryonic kidney 293 cells but not human vascular smooth muscle cells. The cellular difference was attributed in part to a critical protein in NMD, up-frameshift-1 (UPF1), which was found to have low abundance in the vascular cells. Rescue of UPF1 by expression of exogenous UPF1 was found to suppress vascular smooth muscle cell proliferation.
Conclusions
The data suggest: (i) extensive NMD-sensitive transcripts of TRPC1; (ii) inefficient clearance of aberrant transcripts and enhanced proliferation of vascular smooth muscle cells in part because of low UPF1 expression.
【 授权许可】
2011 Dedman et al; licensee BioMed Central Ltd.
【 预 览 】
Files | Size | Format | View |
---|---|---|---|
20150226023111839.pdf | 686KB | download | |
Figure 7. | 18KB | Image | download |
Figure 6. | 42KB | Image | download |
Figure 5. | 44KB | Image | download |
Figure 4. | 27KB | Image | download |
Figure 3. | 70KB | Image | download |
Figure 2. | 57KB | Image | download |
Figure 1. | 52KB | Image | download |
【 图 表 】
Figure 1.
Figure 2.
Figure 3.
Figure 4.
Figure 5.
Figure 6.
Figure 7.
【 参考文献 】
- [1]Venkatachalam K, Montell C: TRP channels. Annu Rev Biochem 2007, 76:387-417.
- [2]Damann N, Voets T, Nilius B: TRPs in our senses. Curr Biol 2008, 18(18):R880-889.
- [3]Beech DJ: TRPC1: store-operated channel and more. Pflugers Arch 2005, 451(1):53-60.
- [4]Rychkov G, Barritt GJ: TRPC1 Ca2+-permeable channels in animal cells. Handb Exp Pharmacol 2007, (179):23-52.
- [5]Zitt C, Zobel A, Obukhov AG, Harteneck C, Kalkbrenner F, Luckhoff A, Schultz G: Cloning and functional expression of a human Ca2+-permeable cation channel activated by calcium store depletion. Neuron 1996, 16(6):1189-1196.
- [6]Ma X, Cao J, Luo J, Nilius B, Huang Y, Ambudkar IS, Yao X: Depletion of intracellular Ca2+ stores stimulates the translocation of vanilloid transient receptor potential 4-c1 heteromeric channels to the plasma membrane. Arterioscler Thromb Vasc Biol 2010, 30(11):2249-2255.
- [7]Al-Shawaf E, Naylor J, Taylor H, Riches K, Milligan CJ, O'Regan D, Porter KE, Li J, Beech DJ: Short-term stimulation of calcium-permeable transient receptor potential canonical 5-containing channels by oxidized phospholipids. Arterioscler Thromb Vasc Biol 2010, 30(7):1453-1459.
- [8]Liu X, Cheng KT, Bandyopadhyay BC, Pani B, Dietrich A, Paria BC, Swaim WD, Beech D, Yildrim E, Singh BB, Birnbaumer L, Ambudkar IS: Attenuation of store-operated Ca2+ current impairs salivary gland fluid secretion in TRPC1(-/-) mice. Proc Natl Acad Sci USA 2007, 104(44):17542-17547.
- [9]Xu SZ, Muraki K, Zeng F, Li J, Sukumar P, Shah S, Dedman AM, Flemming PK, McHugh D, Naylor J, Cheong A, Bateson AN, Munsch CM, Porter KE, Beech DJ: A sphingosine-1-phosphate-activated calcium channel controlling vascular smooth muscle cell motility. Circ Res 2006, 98(11):1381-1389.
- [10]Xu SZ, Sukumar P, Zeng F, Li J, Jairaman A, English A, Naylor J, Ciurtin C, Majeed Y, Milligan CJ, Bahnasi YM, Al-Shawaf E, Porter KE, Jiang LH, Emery P, Sivaprasadarao A, Beech DJ: TRPC channel activation by extracellular thioredoxin. Nature 2008, 451(7174):69-72.
- [11]Seth M, Zhang ZS, Mao L, Graham V, Burch J, Stiber J, Tsiokas L, Winn M, Abramowitz J, Rockman HA, Birnbaumer L, Rosenberg P: TRPC1 channels are critical for hypertrophic signaling in the heart. Circ Res 2009, 105(10):1023-1030.
- [12]Kumar B, Dreja K, Shah SS, Cheong A, Xu SZ, Sukumar P, Naylor J, Forte A, Cipollaro M, McHugh D, Kingston PA, Heagerty AM, Munsch CM, Bergdahl A, Hultgårdh-Nilsson A, Gomez MF, Porter KE, Hellstrand P, Beech DJ: Upregulated TRPC1 channel in vascular injury in vivo and its role in human neointimal hyperplasia. Circ Res 2006, 98(4):557-563.
- [13]Takahashi Y, Watanabe H, Murakami M, Ohba T, Radovanovic M, Ono K, Iijima T, Ito H: Involvement of transient receptor potential canonical 1 (TRPC1) in angiotensin II-induced vascular smooth muscle cell hypertrophy. Atherosclerosis 2007, 195(2):287-296.
- [14]Li J, Sukumar P, Milligan CJ, Kumar B, Ma ZY, Munsch CM, Jiang LH, Porter KE, Beech DJ: Interactions, functions, and independence of plasma membrane STIM1 and TRPC1 in vascular smooth muscle cells. Circ Res 2008, 103(8):e97-104.
- [15]Edwards JM, Neeb ZP, Alloosh MA, Long X, Bratz IN, Peller CR, Byrd JP, Kumar S, Obukhov AG, Sturek M: Exercise training decreases store-operated Ca2+ entry associated with metabolic syndrome and coronary atherosclerosis. Cardiovasc Res 2010, 85(3):631-640.
- [16]Paria BC, Malik AB, Kwiatek AM, Rahman A, May MJ, Ghosh S, Tiruppathi C: Tumor necrosis factor-alpha induces nuclear factor-kappaB-dependent TRPC1 expression in endothelial cells. J Biol Chem 2003, 278(39):37195-37203.
- [17]Wang J, Weigand L, Lu W, Sylvester JT, Semenza GL, Shimoda LA: Hypoxia inducible factor 1 mediates hypoxia-induced TRPC expression and elevated intracellular Ca2+ in pulmonary arterial smooth muscle cells. Circ Res 2006, 98(12):1528-1537.
- [18]Morales S, Diez A, Puyet A, Camello PJ, Camello-Almaraz C, Bautista JM, Pozo MJ: Calcium controls smooth muscle TRPC gene transcription via the CaMK/calcineurin-dependent pathways. Am J Physiol Cell Physiol 2007, 292(1):C553-563.
- [19]Sakura H, Ashcroft FM: Identification of four trp1 gene variants murine pancreatic beta-cells. Diabetologia 1997, 40(5):528-532.
- [20]Wes PD, Chevesich J, Jeromin A, Rosenberg C, Stetten G, Montell C: TRPC1, a human homolog of a Drosophila store-operated channel. Proc Natl Acad Sci USA 1995, 92(21):9652-9656.
- [21]Yang M, Gupta A, Shlykov SG, Corrigan R, Tsujimoto S, Sanborn BM: Multiple Trp isoforms implicated in capacitative calcium entry are expressed in human pregnant myometrium and myometrial cells. Biol Reprod 2002, 67(3):988-994.
- [22]Holbrook JA, Neu-Yilik G, Hentze MW, Kulozik AE: Nonsense-mediated decay approaches the clinic. Nat Genet 2004, 36(8):801-808.
- [23]Chang YF, Imam JS, Wilkinson MF: The nonsense-mediated decay RNA surveillance pathway. Annu Rev Biochem 2007, 76:51-74.
- [24]Isken O, Maquat LE: The multiple lives of NMD factors: balancing roles in gene and genome regulation. Nat Rev Genet 2008, 9(9):699-712.
- [25]Stalder L, Muhlemann O: The meaning of nonsense. Trends Cell Biol 2008, 18(7):315-321.
- [26]Gong Q, Zhang L, Vincent GM, Horne BD, Zhou Z: Nonsense mutations in hERG cause a decrease in mutant mRNA transcripts by nonsense-mediated mRNA decay in human long-QT syndrome. Circulation 2007, 116(1):17-24.
- [27]Baek D, Green P: Sequence conservation, relative isoform frequencies, and nonsense-mediated decay in evolutionarily conserved alternative splicing. Proc Natl Acad Sci USA 2005, 102(36):12813-12818.
- [28]Lewis BP, Green RE, Brenner SE: Evidence for the widespread coupling of alternative splicing and nonsense-mediated mRNA decay in humans. Proc Natl Acad Sci USA 2003, 100(1):189-192.
- [29]Carrier L, Schlossarek S, Willis MS, Eschenhagen T: The ubiquitin-proteasome system and nonsense-mediated mRNA decay in hypertrophic cardiomyopathy. Cardiovasc Res 2010, 85(2):330-338.
- [30]Green RE, Lewis BP, Hillman RT, Blanchette M, Lareau LF, Garnett AT, Rio DC, Brenner SE: Widespread predicted nonsense-mediated mRNA decay of alternatively-spliced transcripts of human normal and disease genes. Bioinformatics 2003, 19(Suppl 1):i118-121.
- [31]Zetoune AB, Fontaniere S, Magnin D, Anczukow O, Buisson M, Zhang CX, Mazoyer S: Comparison of nonsense-mediated mRNA decay efficiency in various murine tissues. BMC Genet 2008, 9:83.
- [32]Gardner LB: Nonsense-mediated RNA decay regulation by cellular stress: implications for tumorigenesis. Mol Cancer Res 2010, 8(3):295-308.
- [33]Medghalchi SM, Frischmeyer PA, Mendell JT, Kelly AG, Lawler AM, Dietz HC: Rent1, a trans-effector of nonsense-mediated mRNA decay, is essential for mammalian embryonic viability. Hum Mol Genet 2001, 10(2):99-105.
- [34]Azzalin CM, Lingner J: The human RNA surveillance factor UPF1 is required for S phase progression and genome stability. Curr Biol 2006, 16(4):433-439.
- [35]Angelini GD, Jeremy JY: Towards the treatment of saphenous vein bypass graft failure--a perspective of the Bristol Heart Institute. Biorheology 2002, 39(3-4):491-499.
- [36]Chu X, Tong Q, Wozney J, Zhang W, Cheung JY, Conrad K, Mazack V, Stahl R, Barber DL, Miller BA: Identification of an N-terminal TRPC2 splice variant which inhibits calcium influx. Cell Calcium 2005, 37(2):173-182.
- [37]Satoh E, Ono K, Xu F, Iijima T: Cloning and functional expression of a novel splice variant of rat TRPC4. Circ J 2002, 66(10):954-958.
- [38]Xu XZ, Moebius F, Gill DL, Montell C: Regulation of melastatin, a TRP-related protein, through interaction with a cytoplasmic isoform. Proc Natl Acad Sci USA 2001, 98(19):10692-10697.
- [39]Zhang W, Chu X, Tong Q, Cheung JY, Conrad K, Masker K, Miller BA: A novel TRPM2 isoform inhibits calcium influx and susceptibility to cell death. J Biol Chem 2003, 278(18):16222-16229.
- [40]Fountain SJ, Cheong A, Flemming R, Mair L, Sivaprasadarao A, Beech DJ: Functional up-regulation of KCNA gene family expression in murine mesenteric resistance artery smooth muscle. J Physiol 2004, 556(Pt 1):29-42.
- [41]Bustin SA, Beaulieu JF, Huggett J, Jaggi R, Kibenge FS, Olsvik PA, Penning LC, Toegel S: MIQE precis: Practical implementation of minimum standard guidelines for fluorescence-based quantitative real-time PCR experiments. BMC Mol Biol 2010, 11:74. BioMed Central Full Text
- [42]Applequist SE, Selg M, Raman C, Jack HM: Cloning and characterization of HUPF1, a human homolog of the Saccharomyces cerevisiae nonsense mRNA-reducing UPF1 protein. Nucleic Acids Res 1997, 25(4):814-821.