期刊论文详细信息
BMC Medical Genetics
Assessment of the 9p21.3 locus in severity of coronary artery disease in the presence and absence of type 2 diabetes
Carlo Briguori4  Gianluigi Condorelli1,12  Cornelia M van Duijn5  Bruno Trimarco6  Flavio Airoldi1,10  Paolo Pagnotta9  Annibale A Puca1,11  Gerolama Condorelli1  Guido Iaccarino1,11  Raffaele Izzo6  Valentina Trimarco2  Najaf Amin5  Lennart C Karssen5  Robert Roberts8  Li Chen8  Alexandre FR Stewart8  Adnan Kastrati1,13  Petra Hoppmann1,13  Werner Koch1,13  Alessandra Mezzelani7  Francesca De Micco1,10  Chiara Viviani-Anselmi1,10  Roberta Roncarati1,12  Robert Carreras-Torres3  Natalia V Rivera1,10 
[1]Department of Biology, Cellular and Molecular Pathology, University Federico II, Naples, Italy
[2]Department of Neuroscience, Federico II University, Federico II University Hospital, Naples, Italy
[3]Facultat de Biologia, Universitat de Barcelona, Barcelona, Spain
[4]Laboratory of Interventional Cardiology, Department of Cardiology, Clinica Meditterranea of Naples, Via Orazio 2, 80121, Naples, Italy
[5]Department of Genetic Epidemiology, Erasmus MC, Rotterdam, The Netherlands
[6]Department of Clinical Medicine and Cardiovascular Sciences, Federico II University Hospital, Naples, Italy
[7]Institute of Biomedical Technologies (ITB), National Research Council (CNR), Milan, Italy
[8]Ruddy Canadian Cardiovascular Genetics Centre, University of Ottawa Heart Institute, Ottawa, Canada
[9]Humanitas Clinical and Research Center, Milan, Rozzano, Italy
[10]IRCCS Multimedica, Via Fantoli 16/15, 20138, Milan, Italy
[11]School of Medicine, University of Salerno, Baronissi, Salerno, Italy
[12]Institute of Genetic and Biomedical Research (IRGB), National Research Council (CNR), Milan, Italy
[13]Deutsches Herzzentrum München, Munich, Germany
关键词: Single nucleotide polymorphism;    Genetics;    9p21.3;    T2D;    Diabetes mellitus;    Coronary artery disease;    Severity of CAD;   
Others  :  1177744
DOI  :  10.1186/1471-2350-14-11
 received in 2012-03-30, accepted in 2012-10-22,  发布年份 2013
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【 摘 要 】

Background

The 9p21.3 locus is strongly associated with the risk of coronary artery disease (CAD) and with type 2 diabetes (T2D). We investigated the association of 9p21.3 variants with severity of CAD (defined by the number of vessel diseased [VD]) in the presence and absence of T2D.

Methods

We tested 11 9p21.3-variants for association in a white Italian study (N = 2,908), and carried out replication in 2 independent white populations, a German study (N = 2,028) and a Canadian Study (N=950). SNP association and permutation analyses were conducted.

Results

We identified two 9p21.3-variants, rs4977574 (P < 4×10-4) and rs2383207 (P < 1.5×10-3) that were associated with severity of CAD in subjects without T2D. Association of rs4977574 with severity of CAD was confirmed in the Canadian Study. Results from subgroup analysis among patients with T2D showed an interaction between rs10738610 and T2D with P = 4.82×10-2. Further investigation showed that rs10738610 (P < 1.99×10-2) was found to be significantly associated with severity of CAD in subjects with T2D.

Conclusions

The 9p21.3 locus is significantly associated with severity of CAD. The number of associations of 9p21.3 variants with severity of CAD is variable to the presence and absence of T2D. In a CAD-susceptible region of 115 kb, there is only one variant associated with the severity of coronary vessel disease in the presence of type 2 diabetes.

【 授权许可】

   
2013 Rivera et al.; licensee BioMed Central Ltd.

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【 参考文献 】
  • [1]Herlitz J, Wognsen GB, Emanuelsson H, Haglid M, Karlson BW, Karlsson T, Albertsson P, Westberg S: Mortality and morbidity in diabetic and nondiabetic patients during a 2-year period after coronary artery bypass grafting. Diabetes Care 1996, 19(7):698-703.
  • [2]Zdravkovic S, Wienke A, Pedersen NL, Marenberg ME, Yashin AI, De Faire U: Heritability of death from coronary heart disease: a 36-year follow-up of 20 966 Swedish twins. J Intern Med 2002, 252:247-254.
  • [3]Schunkert H, Konig IR, Kathiresan S, Reilly MP, Assimes TL, Holm H, Preuss M, Stewart AF, Barbalic M, Gieger C, et al.: Large-scale association analysis identifies 13 new susceptibility loci for coronary artery disease. Nat Genet 2011, 43(4):333-338.
  • [4]Zeggini E, Scott LJ, Saxena R, Voight BF, Marchini JL, Hu T, de Bakker PI, Abecasis GR, Almgren P, Andersen G, et al.: Meta-analysis of genome-wide association data and large-scale replication identifies additional susceptibility loci for type 2 diabetes. Nat Genet 2008, 40(5):638-645.
  • [5]Voight BF, Scott LJ, Steinthorsdottir V, Morris AP, Dina C, Welch RP, Zeggini E, Huth C, Aulchenko YS, Thorleifsson G, et al.: Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis. Nat Genet 2010, 42(7):579-589.
  • [6]Assimes TL, Knowles JW, Basu A, Iribarren C, Southwick A, Tang H, Absher D, Li J, Fair JM, Rubin GD, et al.: Susceptibility locus for clinical and subclinical coronary artery disease at chromosome 9p21 in the multi-ethnic ADVANCE study. Hum Mol Genet 2008, 17(15):2320-2328.
  • [7]Meng W, Hughes AE, Patterson CC, Belton C, Kee F, McKeown PP: Chromosome 9p21.3 is associated with early-onset coronary heart disease in the Irish population. Dis Markers 2008, 25(2):81-85.
  • [8]Schunkert H, Götz A, Braund P, McGinnis R, Tregouet DA, Mangino M, Linsel-Nitschke P, Cambien F, Hengstenberg C, Stark K, et al.: Repeated replication and a prospective meta-analysis of the association between chromosome 9p21.3 and coronary artery disease. Circulation 2008, 117(13):1675-1684.
  • [9]The Wellcome Trust Case Control Consortium: Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. Nature 2007, 447(7145):661-678.
  • [10]Samani NJ, Deloukas P, Erdmann J, Hengstenberg C, Kuulasmaa K, McGinnis R, Coronary Artery Disease Consortium, et al.: Large scale association analysis of novel genetic loci for coronary artery disease. Arterioscler Thromb Vasc Biol 2009, 29(5):774-780.
  • [11]McPherson R, Pertsemlidis A, Kavaslar N, Stewart A, Roberts R, Cox DR, Hinds DA, Pennacchio LA, Tybjaerg-Hansen A, Folsom AR, et al.: A common allele on chromosome 9 associated with coronary heart disease. Science 2007, 316(5830):1488-1491.
  • [12]Broadbent HM, Peden JF, Lorkowski S, Goel A, Ongen H, Green F, Clarke R, Collins R, Franzosi MG, Tognoni G, et al.: Susceptibility to coronary artery disease and diabetes is encoded by distinct, tightly linked SNPs in the ANRIL locus on chromosome 9p. Hum Mol Genet 2008, 17(6):806-814.
  • [13]Scott LJ, Mohlke KL, Bonnycastle LL, Willer CJ, Li Y, Duren WL, Erdos MR, Stringham HM, Chines PS, Jackson AU, et al.: A genome-wide association study of type 2 diabetes in Finns detects multiple susceptibility variants. Science 2007, 316(5829):1341-1345.
  • [14]Zeggini E, Weedon MN, Lindgren CM, Frayling TM, Elliott KS, Lango H, Timpson NJ, Perry JR, Rayner NW, Freathy RM, et al.: Replication of Genome-Wide Association Signals in UK Samples Reveals Risk Loci for Type 2 Diabetes. Science 2007, 316(5829):1336-1341.
  • [15]Helgadottir A, Thorleifsson G, Manolescu A, Gretarsdottir S, Blondal T, Jonasdottir A, Jonasdottir A, Sigurdsson A, Baker A, Palsson A, et al.: A common variant on chromosome 9p21 affects the risk of myocardial infarction. Science 2007, 316(5830):1491-1493.
  • [16]Björck HM, Länne T, Alehagen U, Persson K, Rundkvist L, Hamsten A, Dahlström U, Eriksson P: Association of genetic variation on chromosome 9p21.3 and arterial stiffness. J Intern Med 2009, 265(3):373-381.
  • [17]Helgadottir A, Thorleifsson G, Magnusson KP, Grétarsdottir S, Steinthorsdottir V, Manolescu A, Jones GT, Rinkel GJ, Blankensteijn JD, Ronkainen A, et al.: The same sequence variant on 9p21 associates with myocardial infarction, abdominal aortic aneurysm and intracranial aneurysm. Nat Genet 2008, 40(2):217-224.
  • [18]Hu WL, Li SJ, Liu DT, Wang Y, Niu SQ, Yang XC, Zhang Q, Yu SZ, Jin L, Wang XF: Genetic variants on chromosome 9p21 and ischemic stroke in Chinese. Brain Res Bull 2009, 79(6):431-435.
  • [19]Wahlstrand B, Orho-Melander M, Delling L, Kjeldsen S, Narkiewicz K, Almgren P, Hedner T, Melander O: The myocardial infarction associated CDKN2A/CDKN2B locus on chromosome 9p21 is associated with stroke independently of coronary events in patients with hypertension. J Hypertens 2009, 27(4):769-773.
  • [20]Shete S, Hosking FJ, Robertson LB, Dobbins SE, Sanson M, Malmer B, Simon M, Marie Y, Boisselier B, Delattre JY, et al.: Genome-wide association study identifies five susceptibility loci for glioma. Nat Genet 2009, 41(8):899-904.
  • [21]Bishop DT, Demenais F, Iles MM, Harland M, Taylor JC, Corda E, Randerson-Moor J, Aitken JF, Avril MF, Azizi E, et al.: Genome-wide association study identifies three loci associated with melanoma risk. Nat Genet 2009, 41(8):920-925.
  • [22]Silander K, Tang H, Myles S, Jakkula E, Timpson NJ, Cavalli-Sforza L, Peltonen L: Worldwide patterns of haplotype diversity at 9p21.3, a locus associated with type 2 diabetes and coronary heart disease. Genome Medicine 2009, 1(5):51. BioMed Central Full Text
  • [23]Scanlon PJ, Faxon DP, Audet AM, Carabello B, Dehmer GJ, Eagle KA, Legako RD, Leon DF, Murray JA, Nissen SE, et al.: ACC/AHA guidelines for coronary angiography. A report of the American College of Cardiology/American Heart Association Task Force on practice guidelines (Committee on Coronary Angiography). Developed in collaboration with the Society for Cardiac Angiography and Interventions. J Am Coll Cardiol 1999, 33(6):1756-1824.
  • [24]De Luca N, Izzo R, Iaccarino G, Malini PL, Morisco C, Rozza F, Iovino GL, Rao MA, Bodenizza C, Lanni F, et al.: The use of a telematic connection for the follow-up of hypertensive patients improves the cardiovascular prognosis. J Hypertens 2005, 23(7):1417-1423.
  • [25]Hoppmann P, Erl A, Türk S, Tiroch K, Mehilli J, Schömig A, Kastrati A, Koch W: No Association of Chromosome 9p21.3 Variation With Clinical and Angiographic Outcomes After Placement of Drug-Eluting Stents. JACC Cardiovasc Interv 2009, 2(11):1149-1155.
  • [26]Stewart AF, Dandona S, Chen L, Assogba O, Belanger M, Ewart G, LaRose R, Doelle H, Williams K, Wells GA, et al.: Kinesin family member 6 variant Trp719Arg does not associate with angiographically defined coronary artery disease in the Ottawa Heart Genomics Study. J Am Coll Cardiol 2009, 53(16):1471-1472.
  • [27]Dandona S, Roberts R: Creating a genetic risk score for coronary artery disease. Curr Atheroscler Rep 2009, 11(3):175-181.
  • [28]Gensini GG: A more meaningful scoring system for determining the severity of coronary heart disease. Am J Cardiol 1983, 51(3):606-606.
  • [29]Montorsi P, Ravagnani PM, Galli S, Salonia A, Briganti A, Werba JP, Montorsi F: Association between erectile dysfunction and coronary artery disease: matching the right target with the right test in the right patient. Eur Urol 2006, 50(4):721-731.
  • [30]Afonso L, Niraj A, Veeranna V, Fakhry H, Pradhan J: Ethnic and sex differences in disease burden in patients undergoing coronary angiography: the confounding influence of obesity. Ethn Dis Winter 2008, 18(1):53-58.
  • [31]Miller JM, Rochitte CE, Dewey M, Arbab-Zadeh A, Niinuma H, Gottlieb I, Paul N, Clouse ME, Shapiro EP, Hoe J, et al.: Diagnostic performance of coronary angiography by 64-Row CT. N Engl J Med 2008, 359(22):2324-2336.
  • [32]Dahlen GH, Guyton JR, Attar M, Farmer JA, Kautz JA, Gotto AM Jr: Association of levels of lipoprotein Lp(a), plasma lipids, and other lipoproteins with coronary artery disease documented by angiography. Circulation 1986, 74(4):758-765.
  • [33]Aulchenko Y, Struchalin M: GenABEL: genome-wide SNP association analysis - R package. http://cran.r-project.org/ webcite. 2009
  • [34]Dandona S, Stewart AF, Chen L, Williams K, So D, O'Brien E, Glover C, Lemay M, Assogba O, Vo L, et al.: Gene dosage of the common variant 9p21 predicts severity of coronary artery disease. J Am Coll of Cardiol 2010, 56(6):479-486.
  • [35]Harper JW: Cyclin dependent kinase inhibitors. Cancer surveys 1997, 29:91-107.
  • [36]Fischer PM, Endicott J, Meijer L: Cyclin-dependent kinase inhibitors. Progress in cell cycle research 2003, 5:235-248.
  • [37]Kalinina N, Agrotis A, Antropova Y, Ilyinskaya O, Smirnov V, Tararak E, Bobik A: Smad expression in human atherosclerotic lesions: evidence for impaired TGF-beta/Smad signaling in smooth muscle cells of fibrofatty lesions. Arterioscler Thromb Vasc Biol 2004, 24(8):1391-1396.
  • [38]Liu Y, Sanoff HK, Cho H, Burd CE, Torrice C, Mohlke KL, Ibrahim JG, Thomas NE, Sharpless NE: INK4/ARF transcript expression is associated with chromosome 9p21 variants linked to atherosclerosis. PLoS One 2009, 4(4):e5027.
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