期刊论文详细信息
BMC Genetics
Mutation in MEOX1 gene causes a recessive Klippel-Feil syndrome subtype
Hamit Zafer Kars1  Unal Ozum1  Burak Kazanci3  Ahmet Rasit Ozturk2  Sirin Yuksel5  Mahmut Samil Sagiroglu4  Bekir Erguner4  Ugur Kartal7  Hatice Balaban6  Cengiz Yakicier5  Bulent Guclu3  Fatih Bayrakli7 
[1] Department of Neurosurgery, Cumhuriyet University School of Medicine, Kampus, Merkez, 58140, Sivas, Turkey;Informatics Institute, Middle East Technical University, Ankara, Turkey;Neurosurgery Clinic, Ministry of Health, Sevket Yilmaz Research and Training Hospital, Bursa, Turkey;TUBITAK BILGEM, Kocaeli, Turkey;Department of Medical Biology, Acibadem University School of Medicine, İstanbul, Turkey;Department of Neurology, Cumhuriyet University School of Medicine, Sivas, Turkey;Molecular Neurogenetics Research Laboratory, Department of Neurosurgery, Cumhuriyet University School of Medicine, Sivas, Turkey
关键词: Whole genome linkage analysis;    Vertebra;    Whole-exome sequencing;    MEOX1;    Klippel-Feil syndrome;   
Others  :  1086577
DOI  :  10.1186/1471-2156-14-95
 received in 2013-06-19, accepted in 2013-09-26,  发布年份 2013
PDF
【 摘 要 】

Background

Klippel-Feil syndrome (KFS) is characterized by the developmental failure of the cervical spine and has two dominantly inherited subtypes. Affected individuals who are the children of a consanguineous marriage are extremely rare in the medical literature, but the gene responsible for this recessive trait subtype of KFS has recently been reported.

Results

We identified a family with the KFS phenotype in which their parents have a consanguineous marriage. Radiological examinations revealed that they carry fusion defects and numerical abnormalities in the cervical spine, scoliosis, malformations of the cranial base, and Sprengel’s deformity. We applied whole genome linkage and whole-exome sequencing analysis to identify the chromosomal locus and gene mutated in this family. Whole genome linkage analysis revealed a significant linkage to chromosome 17q12-q33 with a LOD score of 4.2. Exome sequencing identified the G > A p.Q84X mutation in the MEOX1 gene, which is segregated based on pedigree status. Homozygous MEOX1 mutations have reportedly caused a similar phenotype in knockout mice.

Conclusions

Here, we report a truncating mutation in the MEOX1 gene in a KFS family with an autosomal recessive trait. Together with another recently reported study and the knockout mouse model, our results suggest that mutations in MEOX1 cause a recessive KFS phenotype in humans.

【 授权许可】

   
2013 Bayrakli et al.; licensee BioMed Central Ltd.

【 预 览 】
附件列表
Files Size Format View
20150116013110285.pdf 2445KB PDF download
Figure 4. 123KB Image download
Figure 3. 68KB Image download
Figure 2. 92KB Image download
Figure 1. 103KB Image download
【 图 表 】

Figure 1.

Figure 2.

Figure 3.

Figure 4.

【 参考文献 】
  • [1]Tracy MR, Dormans JP, Kusumi K: Klippel-Feil syndrome: clinical features and current understanding of etiology. Clin Orthop Relat Res 2004, 424:183-190.
  • [2]Kaplan KM, Spivak JM, Bendo JA: Embryology of the spine and associated congenital abnormalities. Spine J 2005, 5(5):564-576.
  • [3]Harvey EJ, Bernstein M, Desy NM, Saran N, Ouellet JA: Sprengel deformity: pathogenesis and management. J Am Acad Orthop Surg 2012, 20(3):177-186.
  • [4]Saga Y: The mechanism of somite formation in mice. Curr Opin Genet Dev 2012, 22(4):331-338.
  • [5]Skuntz S, Mankoo B, Nguyen MT, Hustert E, Nakayama A, Tournier-Lasserve E, Wright CV, Pachnis V, Bharti K, Arnheiter H: Lack of the mesodermal homeodomain protein MEOX1 disrupts sclerotome polarity and leads to a remodeling of the cranio-cervical joints of the axial skeleton. Dev Biol 2009, 332(2):383-395.
  • [6]Mankoo BS, Skuntz S, Harrigan I, Grigorieva E, Candia A, Wright CV, Arnheiter H, Pachnis V: The concerted action of Meox homeobox genes is required upstream of genetic pathways essential for the formation, patterning and differentiation of somites. Development 2003, 130(19):4655-4664.
  • [7]Mankoo BS, Collins NS, Ashby P, Grigorieva E, Pevny LH, Candia A, Wright CV, Rigby PW, Pachnis V: Mox2 is a component of the genetic hierarchy controlling limb muscle development. Nature 1999, 400(6739):69-73.
  • [8]Mohamed JY, Faqeih E, Alsiddiky A, Alshammari MJ, Ibrahim NA, Alkuraya FS: Mutations in MEOX1, encoding mesenchyme homeobox 1, cause Klippel-Feil anomaly. Am J Hum Genet 2013, 92(1):157-161.
  • [9]Kervestin S, Jacobson A: NMD: a multifaceted response to premature translational termination. Nat Rev Mol Cell Biol 2012, 13(11):700-712.
  • [10]Douville JM, Cheung DY, Herbert KL, Moffatt T, Wigle JT: Mechanisms of MEOX1 and MEOX2 regulation of the cyclin dependent kinase inhibitors p21 and p16 in vascular endothelial cells. PLoS One 2011, 6(12):e29099.
  • [11]Abecasis GR, Cherny SS, Cookson WO, Cardon LR: Merlin–rapid analysis of dense genetic maps using sparse gene flow trees. Nat Genet 2002, 30(1):97-101.
  • [12]Carr IM, Flintoff KJ, Taylor GR, Markham AF, Bonthron DT: Interactive visual analysis of SNP data for rapid autozygosity mapping in consanguineous families. Hum Mutat 2006, 27(10):1041-1046.
  • [13]Li H, Durbin R: Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 2009, 25(14):1754-1760.
  • [14]Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R: The sequence alignment/map format and SAMtools. Bioinformatics 2009, 25(16):2078-2079.
  • [15]Quinlan AR, Hall IM: BEDTools: a flexible suite of utilities for comparing genomic features. Bioinformatics 2010, 26(6):841-842.
  • [16]DePristo MA, Banks E, Poplin R, Garimella KV, Maguire JR, Hartl C, Philippakis AA, Del Angel G, Rivas MA, Hanna M, et al.: A framework for variation discovery and genotyping using next-generation DNA sequencing data. Nat Genet 2011, 43(5):491-498.
  • [17]Wang K, Li M, Hakonarson H: ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data. Nucleic Acids Res 2010, 38(16):e164.
  • [18]Teer JK, Green ED, Mullikin JC, Biesecker LG: VarSifter: visualizing and analyzing exome-scale sequence variation data on a desktop computer. Bioinformatics 2012, 28(4):599-600.
  • [19]Robinson JT, Thorvaldsdottir H, Winckler W, Guttman M, Lander ES, Getz G, Mesirov JP: Integrative genomics viewer. Nat Biotechnol 2011, 29(1):24-26.
  文献评价指标  
  下载次数:15次 浏览次数:19次